Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2379 |
Symbol | secY |
ID | 4204701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2607045 |
End bp | 2608322 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566928 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_699643 |
Protein GI | 110802915 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTATCAA CCCTACGTAA TGCCTGGAAG GTTCAAGATT TAAGAAAAAA AATAATTTGG ACTGTATTCT TAATAGCAAT TTTCAGGATG GGAAGTTATA TTCCTGTTCC TGGAATTGAT ACAGATAGTC TAAAAGCTTT AACACAATCA GGAAGTTTAG TAAGCTTCTA TGATTTAATT TCTGGTGGTT CTTTTAGTAG ATTTAGTATA TTCGCTTTAG GTGTTGTACC ATACATCAAT GCTTCAATCA TTATGCAACT TTTAACAGTT GCAATTCCTA AATTAGAACA ATTGTCTAAA GAGGGAGATG ATGGAAGAAA GAAAATCCAA AAGATAACTA GATATGCTTC AATTGTTATT GGAGCAATCA CTGCTTATGG AAGTTATGTG ATAATTCACA ATGTTGGCGC ACTTAAGAGC AATTCTCCAG TTAGTATGTT TTTAATATTA CTAACACTAG TAGTTGGATC AACTTTCTTA ATGTGGTTAG GAGATCAAAT CACAGTTAAA GGAGTAGGAA ATGGTACTTC CTTGATAATA TTTGCAAATA TATTATCAAG TTTACCAATG ACTGGTTATC AAATATATAA CTTAAGTAAG ATAGGTAAAA TAAATGTTGT TGAAATAGCA TTATTTATTT TCTTTACATT AGCTTTATTA GCAGGTGTAA TTTACCTATC ATTAGCTGAA AGAAGAATTA CTGTACAATA TGCAGGTAAA GCCGTAGGTA ATAAAATGAT GAAGGGACAA TCAACTCATA TTCCATTAAG TATTATTGGA ACAACTGTTA TAGCAATAAT CTTTGCTATG TCTGTGATGA GTTTCCCAAC AACTATAGCT CAATTCTTCC CAGAAGCTGG ATGGTCACAA TGGATTACAG GATCTTCTTA CAGTCCTTTC AATGCAAAGA CTTGGATGTA TCCAGTATTA TATGCATTAC TGACTATATT CTTTACTTGG TTCTATACTC AAATAACATT TAAGCCAGAT GAAATGGCTG AGAATATGCA TAAATCATCA GGTTTCATTC CTGGAATAAG ACCTGGAAAA CCAACAGAGA TTTATTTAGA GAAAGTATTA AATAGAATTT CAATGTTTGG TGGATGTTTT GCTGCTATTA TAGCAGTAGT TCCTATTTTA GTTGCAAACT ATACTCCTTT CCAAGGAATA CAGTTTGGAG GAACATCACT GTTAATTCTA GTTTCTGTTT CATTAGAAAT AATGAGACAA TTAGAATCTC AATTAACAAT GAGACATTAC CAAGGATTCT TAAAATAG
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Protein sequence | MLSTLRNAWK VQDLRKKIIW TVFLIAIFRM GSYIPVPGID TDSLKALTQS GSLVSFYDLI SGGSFSRFSI FALGVVPYIN ASIIMQLLTV AIPKLEQLSK EGDDGRKKIQ KITRYASIVI GAITAYGSYV IIHNVGALKS NSPVSMFLIL LTLVVGSTFL MWLGDQITVK GVGNGTSLII FANILSSLPM TGYQIYNLSK IGKINVVEIA LFIFFTLALL AGVIYLSLAE RRITVQYAGK AVGNKMMKGQ STHIPLSIIG TTVIAIIFAM SVMSFPTTIA QFFPEAGWSQ WITGSSYSPF NAKTWMYPVL YALLTIFFTW FYTQITFKPD EMAENMHKSS GFIPGIRPGK PTEIYLEKVL NRISMFGGCF AAIIAVVPIL VANYTPFQGI QFGGTSLLIL VSVSLEIMRQ LESQLTMRHY QGFLK
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