Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2360 |
Symbol | |
ID | 4204800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2593060 |
End bp | 2593917 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566910 |
Product | hypothetical protein |
Protein accession | YP_699625 |
Protein GI | 110801888 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.411181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTACA TCAAAGAGAA AAAAGAATTA CTAATTGATA ATGCATTTAT TCTAATAGGT TGCTTTATTT CATCTTTAGG AGTAAACCTA TTTTTATCAA ATGCAAAACT TCTTAGCGGT GGAGCAACAG GTATTGCACT TATCTTTCAA TACTTAATGG GAGTTAACTC AGGTATTGTT GTTTTACTCA TAAACATTCC ATTATTTATA CTTAGTTATT TTAAACTATC AAAACAGTTT ACATTTAACT CAGCTATAGG AATGCTAGCT TTATCACTTT CGTTAATGAT AACAGCCCCA GTATCACACC TTATTACCTT AGATGACAAA TTACTATACT GTGTTTTTGG TGGTGCTATC TGTGGTTTTG GTTACGGTTT AGTATTTTCT AAAGGTGGAT CAACTGGCGG AACAGATATA GTTACTATGG TTATACGTAA AAAATATTCA AATTTTAATA TAGGTTCATT AAGCTTTATA TTAAATATGT GTATCGTTGG TATAGGAGCA ATTTTCTTTG GACTAGAAAC AGCACTTTAT ACTCTTATAT CTATATTTGT ACAAACAGTA CTAGTTGATA AAGTTATTAA AGGGATACAC TCAAAACAAT TATTGCTTAT AATAACCGAT AAAGAACAAC AAGTTATAAA TTATATAATA GAAGATCTTC ATAGAGGAGT AACTTCTCTT TTAGCTGAAG GAGAATATAC TCATGACAGA AAGAAAATGC TTTACTGTCT AGTTACTACA AGACAAATGA TTGAATTAAA AAACACAATA CATTATATAG ATCCAAATGC CTTTATAACT ATAATGGACG TTTCAGAAGT TAAAGGAAAA GGCTTTAAAA ATATATAA
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Protein sequence | MNYIKEKKEL LIDNAFILIG CFISSLGVNL FLSNAKLLSG GATGIALIFQ YLMGVNSGIV VLLINIPLFI LSYFKLSKQF TFNSAIGMLA LSLSLMITAP VSHLITLDDK LLYCVFGGAI CGFGYGLVFS KGGSTGGTDI VTMVIRKKYS NFNIGSLSFI LNMCIVGIGA IFFGLETALY TLISIFVQTV LVDKVIKGIH SKQLLLIITD KEQQVINYII EDLHRGVTSL LAEGEYTHDR KKMLYCLVTT RQMIELKNTI HYIDPNAFIT IMDVSEVKGK GFKNI
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