Gene CPR_2317 details

Gene Information

• Locus tag: CPR_2317
• Symbol: thrS
• ID: 4204685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2535920
• End bp: 2537851
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642566868
• Product: threonyl-tRNA synthetase
• Protein accession: YP_699583
• Protein GI: 110802298
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA TTACACTTAA AGATGGTTCA ATAAAAGAAG TTGAAGCTGG ACTATCAATT 
TTTGAAATAG CTCAAAGCAT AAGCCAAGGA CTAGCTAGAA ATGCTTGTTG TGGTATATTA 
AACGGAAAAG TTGAGGACTT AAGATTTATA GTTAATGAAG ATTCTTCATT AGAAATCTGT 
ACTTTTGATT CTAAAGAAGG TCAACATGCT TTTAACCACA CTGCTTCTCA CGTATTAGCA 
GCTGCCGTTA AAAGATTATT CCCTCAAGAT AAATTAGCTA TAGGACCATC AATAGATAAT 
GGTTTCTATT ATGATTTTGA TACTGAAAAA TCATTCTCTG CTGACCAATT AAACAAATTA 
GAAGAAGAGA TGAAAAAAAT AATAAAAGAA AATCCTGAAA TAAAAAGATT TGAACTTCCT 
AGAAACGAAG CTTTAGAACT TATGAAGGAT GAACCTTACA AAGTTGAACT TATAAATGAT 
CTTCCAGAAG GTGAAGTAAT TTCATTCTAT CAAATAGGTG ATTTTGTTGA CCTTTGTGCA 
GGACCTCACT TAATGGCTGT TAAACCAATA AAAGCAGTTA AATTATTAAG ATCTACTGGT 
GCTTACTGGA AAGGTGACGA AAAGAACAAA ATGCTTTCAA GAGTATATGG AACTGCTTTC 
CCTAAGAAAT CAGAATTAGA TGCTTATTTA GAAGCTTTAG AAGAAGCTAA GAAAAGAGAC 
CATAATAAAT TAGGTAGAGA GCTTGGAATC TTTACTACTG ATGAAAATGT AGGTCAAGGT 
CTTCCACTAT TAATGCCAAA GGGAGCTAGA ATAATCCAAA CTCTTCAAAG ATGGATAGAA 
GACGAAGAAC AAAGAAGAGG ATATGTTTTA ACTAAAACTC CTTTAATGGC TAAAAGTGAC 
CTTTACAAAA TTTCAGGACA CTGGGATCAC TATAAAGATG GTATGTTCGT TTTAGGTGAT 
GAGGAAAAAG ATAGTGAAGT GTTTGCTTTA AGACCAATGA CTTGCCCATT CCAATACGCA 
ATATATAACT CAACTCAACA CAGTTATAGA GACTTACCAG TAAGATTTGC TGAAACTTCT 
ACTCTATTTA GAAATGAATC TTCAGGAGAA ATGCACGGTC TTATAAGAGT AAGACAATTC 
ACTCTTGCTG ATGGACACAT AGTATGTACT CCAGAGCAAT TAGAAGATGA ATTCAAAAAC 
ACTGTTGACT TAGTTAAATA TGTTATGGAA ACTTTAGGAA TTGCTGATGA TATTACTTAC 
AGATTCTCAA AATGGGATCC AAACAATACT GAGAAATACA TCAATGATCC TGAAGCTTGG 
GAAAATACTC AAAATATAAT GAGAGAAATA TTAAACCACT TAAATATAGA CTTTACTGAA 
GCTGATGATG AAGCTGCTTT CTATGGTCCA AAACTTGATA TCCAATTCAA GAATGTTCAT 
GGAAAAGAAG ATACAATCAT CACTATCCAA ATAGACTTCG CTTTAGCTGA AAGATTTGGA 
ATGTACTACA TCGATAAAGA TGGAGAAAAG AAACGTCCTT ACATCATTCA TAGAAGTTCA 
ATTGGATGTT ATGAAAGAAC TCTAGCAATG CTTATAGAAA AATATGCAGG TGCTCTTCCA 
ACTTGGATAG CTCCAGTTCA AGCTAAAGTT CTTCCTTTAT CAGATAAATA TGCTGATTAT 
GCAAATGAAG TTGTTGAAGA ATTAAGAAGA AGAGGAGTTA GAGTTGAAGC TGACCACAGA 
GCTGAAAAAA TCGGTTATAA AATAAGAGAA GCTAGATTAG AAAGAACTCC TTATATCTTA 
GTTGTTGGAG AAAAAGAAGC TGAAAACAAA GAAGTTTCTG TAAGAAGCAG AAAGAACGGT 
GAAGAAGGTG CTATGCCTTT AGCTGACTTC GTAAACAGAA TAGTTCTTGA AATAGCTAAC 
AGAGAAAACT AA 

 

Protein sequence

MIKITLKDGS IKEVEAGLSI FEIAQSISQG LARNACCGIL NGKVEDLRFI VNEDSSLEIC 
TFDSKEGQHA FNHTASHVLA AAVKRLFPQD KLAIGPSIDN GFYYDFDTEK SFSADQLNKL 
EEEMKKIIKE NPEIKRFELP RNEALELMKD EPYKVELIND LPEGEVISFY QIGDFVDLCA 
GPHLMAVKPI KAVKLLRSTG AYWKGDEKNK MLSRVYGTAF PKKSELDAYL EALEEAKKRD 
HNKLGRELGI FTTDENVGQG LPLLMPKGAR IIQTLQRWIE DEEQRRGYVL TKTPLMAKSD 
LYKISGHWDH YKDGMFVLGD EEKDSEVFAL RPMTCPFQYA IYNSTQHSYR DLPVRFAETS 
TLFRNESSGE MHGLIRVRQF TLADGHIVCT PEQLEDEFKN TVDLVKYVME TLGIADDITY 
RFSKWDPNNT EKYINDPEAW ENTQNIMREI LNHLNIDFTE ADDEAAFYGP KLDIQFKNVH 
GKEDTIITIQ IDFALAERFG MYYIDKDGEK KRPYIIHRSS IGCYERTLAM LIEKYAGALP 
TWIAPVQAKV LPLSDKYADY ANEVVEELRR RGVRVEADHR AEKIGYKIRE ARLERTPYIL 
VVGEKEAENK EVSVRSRKNG EEGAMPLADF VNRIVLEIAN REN