Gene CPR_2302 details

Gene Information

• Locus tag: CPR_2302
• Symbol: ispF
• ID: 4205508
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2528655
• End bp: 2529125
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 642566853
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_699577
• Protein GI: 110802631
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0549282
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATAG GAATGGGATA TGATGTTCAT AAATTAGTTG AAAATAGAGA TTTAATATTA 
GGTGGAGTAA AAATTCCTTA TGAAAAAGGA CTTTTAGGCC ATTCAGATGC TGATGTATTA 
TTACACGCAA TAATGGATTC ACTTTTAGGA GCAGCGGCTC TAGGAGATAT AGGAAAGTAT 
TTCCCAGATA CAGATCCTAA ATATAAAGGT GCTGATAGCA TAAAACTTCT AGAATTTGTA 
GGTGAACTTT TAAATAAAAA TAACTACAAA ATATCAAATA TAGATGCAAC TATAATAGCT 
CAAAGACCAA AAATGGCTCC TCATATACCT ACTATGAGAG AAAATATAGC TAAAGCATTA 
AATATAGACT TAGATAAAAT AAATGTTAAA GCAACTACTG AGGAAGGACT TGGTTTTACT 
GGTACTGGAG AAGGAATCTC ATCTCAAAGT ATTTGTCTTT TAATAAAGTA A 

 

Protein sequence

MRIGMGYDVH KLVENRDLIL GGVKIPYEKG LLGHSDADVL LHAIMDSLLG AAALGDIGKY 
FPDTDPKYKG ADSIKLLEFV GELLNKNNYK ISNIDATIIA QRPKMAPHIP TMRENIAKAL 
NIDLDKINVK ATTEEGLGFT GTGEGISSQS ICLLIK