| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2299 |
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| Symbol | |
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| ID | 4205637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2525670 |
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| End bp | 2526566 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566850 |
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| Product | ribosomal large subunit pseudouridine synthase f |
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| Protein accession | YP_699574 |
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| Protein GI | 110803415 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAAAG TATCAAAAAA TAACAATAGA AGAGATAAGA GTTTATTTAA TAAAAAGTTT
AAGAGTGAAG ATAAAAATTT AAATAAAGCT AATAAAAATA ATAAACAAAA AGTAGCTAAA
AAAGCTTCAG TAAAAAATAC TATTATAGTA TCAAATAAAA ATGAAATAAG AGATGAAGTT
AGATTAAATA AATATATAAG TGAAACAGGA TTTTGCTCAA GGAGAGAGGC TGATAAGCTT
ATAGAACAAG GAAGAGTTAA GATAGACGGG GTAAAGGCTA CAACTGGTAT GAAGGTTTCA
AAGGGGCAAA GTGTATTTAT TGATGGAAAA CCTCTAAAGG TTGAAAATGA ACTAGTTTAT
ATAGTTTTAA ATAAGCCTGT TGGAATAACT TGTACTACTG AGAGCAAGAT AAAAGGTAAT
ATAGTTGACT TTATAAATCA TGAAAAAAGA ATTTTTCCAA TAGGAAGATT AGATAAGGAT
TCTCAAGGAT TAATATTTAT GACTAATGAT GGTGATATAG TTAATAAGAT ATTAAGAGCT
GGGAATAATC ATGAAAAAGA ATATATTGTC ACTGTAAATA AGCCTATAAC TGATGAGTTT
ATAAAAGGAA TGAGCAATGG AGTGCCTATA CTAGGAACAG TTACTAAGAA ATGCTTAGTT
AAGAAAGAAA GCAAAAATTC ATTTAGAATA ATATTAACTC AAGGGTTAAA TAGACAGATA
AGAAGAATGT GTGAATATTT TGGATATGAG GTCAAAAAAT TAGAAAGAAT AAGAATAATG
AATGTTAGCT TAGGAAACCT AAAGATAGGA TCTTGGAGAT ACTTAACTAA GAAAGAGTTA
GCTGAAATAA ACAGGTTAAC AGAAAACTCT TCAAAGACTG AAGAGGCCTC AATTTAA
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| Protein sequence | MRKVSKNNNR RDKSLFNKKF KSEDKNLNKA NKNNKQKVAK KASVKNTIIV SNKNEIRDEV
RLNKYISETG FCSRREADKL IEQGRVKIDG VKATTGMKVS KGQSVFIDGK PLKVENELVY
IVLNKPVGIT CTTESKIKGN IVDFINHEKR IFPIGRLDKD SQGLIFMTND GDIVNKILRA
GNNHEKEYIV TVNKPITDEF IKGMSNGVPI LGTVTKKCLV KKESKNSFRI ILTQGLNRQI
RRMCEYFGYE VKKLERIRIM NVSLGNLKIG SWRYLTKKEL AEINRLTENS SKTEEASI
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