Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2290 |
Symbol | |
ID | 4205009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2515773 |
End bp | 2516132 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566841 |
Product | transcription repressor SmtB-like protein |
Protein accession | YP_699565 |
Protein GI | 110803258 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0771617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATA ATAAAATAGA AAGTTGTAAC TGTTCTTATA TCCATGAAGA TATATTAAGT AGGGTAAAAG AACATTTGCC AAAGGAAGAA GTACTTTATG AATTAGCAGA AATATTTAAA GTTTTTGGAG ATTCAACAAG AATAAAAATT TTATGTGCCC TTTTTGAAGG TGAAATGTGT GTGTGTGATA TGGCTGAATT ATTAGGTGTA AGTCAATCAG CAGTATCTCA TCAATTGAGA GTTTTAAAAC AAGCTAGATT AGTTAAGTTT AGAAGAGATG GCAAGATAGT TTATTACTCT TTAGCTGATG ATCATGTTAA ACACATATTC AATGAAGGTT TAAATCACGT TTTAGAGTAA
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Protein sequence | MDNNKIESCN CSYIHEDILS RVKEHLPKEE VLYELAEIFK VFGDSTRIKI LCALFEGEMC VCDMAELLGV SQSAVSHQLR VLKQARLVKF RRDGKIVYYS LADDHVKHIF NEGLNHVLE
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