Gene CPR_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2290 
Symbol 
ID4205009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2515773 
End bp2516132 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content29% 
IMG OID642566841 
Producttranscription repressor SmtB-like protein 
Protein accessionYP_699565 
Protein GI110803258 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0771617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATA ATAAAATAGA AAGTTGTAAC TGTTCTTATA TCCATGAAGA TATATTAAGT 
AGGGTAAAAG AACATTTGCC AAAGGAAGAA GTACTTTATG AATTAGCAGA AATATTTAAA
GTTTTTGGAG ATTCAACAAG AATAAAAATT TTATGTGCCC TTTTTGAAGG TGAAATGTGT
GTGTGTGATA TGGCTGAATT ATTAGGTGTA AGTCAATCAG CAGTATCTCA TCAATTGAGA
GTTTTAAAAC AAGCTAGATT AGTTAAGTTT AGAAGAGATG GCAAGATAGT TTATTACTCT
TTAGCTGATG ATCATGTTAA ACACATATTC AATGAAGGTT TAAATCACGT TTTAGAGTAA
 
Protein sequence
MDNNKIESCN CSYIHEDILS RVKEHLPKEE VLYELAEIFK VFGDSTRIKI LCALFEGEMC 
VCDMAELLGV SQSAVSHQLR VLKQARLVKF RRDGKIVYYS LADDHVKHIF NEGLNHVLE