Gene CPR_2288 details

Gene Information

• Locus tag: CPR_2288
• ID: 4204348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2512436
• End bp: 2513074
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 642566839
• Product: redox-sensing transcriptional repressor Rex
• Protein accession: YP_699563
• Protein GI: 110801673
• COG category: [R] General function prediction only
• COG ID: [COG2344] AT-rich DNA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.307621
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGA AAAAAGGCAT ATCTATGGCT GTAATAAAAA GATTGCCTAA ATACCATAGA 
TATTTACAAG AATTAATGGA AAATGATATT GATAGAATAT CTTCAAAAGA GTTAAGCGAA 
AAAATAGGCT TTACGGCTTC TCAAATAAGA CAGGATCTTA ATTGTTTTGG AGATTTTGGG 
CAACAGGGAT ATGGATACAA TGTAAAAGAG TTATATAATA ACATAGGAAA CATATTAGGA 
CTTACAAGAG ACTATAATAC AGTTATAATC GGAGCTGGTA ATATAGGTCA GGCAATTGCA 
AATTACAATA GTTTCAACAG ATTAGGATTT AAATTAAAAG GTATTTTTGA TGCTAATCCT 
AGAATGTTTG GAATAAAAAT AAGAGATATT GAAATACAAG ATGTTGAAAA ATTAAAAGAT 
TTCGTAAAAG AAAATGATAT TGAAATAGGT ATAATCTGTG TTCCAAGAAC AAATGCTCAA 
AAGGTATGTA ATGAACTTGT TGAAGGTGGA ATTAAAGGTA TATGGAACTT TGCACCTATA 
GATTTAGATG TTCCAAAAGA TATAAGAGTA GAAAATGTAC ATTTAAGTGA AAGTATGATG 
ACTTTAGTGT ATCTTTTAAA TCATAATGAT GTAAAATAA 

 

Protein sequence

MEKKKGISMA VIKRLPKYHR YLQELMENDI DRISSKELSE KIGFTASQIR QDLNCFGDFG 
QQGYGYNVKE LYNNIGNILG LTRDYNTVII GAGNIGQAIA NYNSFNRLGF KLKGIFDANP 
RMFGIKIRDI EIQDVEKLKD FVKENDIEIG IICVPRTNAQ KVCNELVEGG IKGIWNFAPI 
DLDVPKDIRV ENVHLSESMM TLVYLLNHND VK