Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2257 |
Symbol | |
ID | 4205585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2474188 |
End bp | 2475153 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566809 |
Product | oligopeptide ABC transporter, permease component |
Protein accession | YP_699533 |
Protein GI | 110803345 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACAGT ATATCACTAG AAGAATACTA TTAATAATAC CGACTATTGT TGGCGTATCA TTAGTACTTT TCTTCATATT TGCTATGGCT CCAGGAGATG CTATTACAGC AAATATGGAT CCAAATATGA GTGTAGAAAC AAAACAAGCA ATAAGAGAAA AATATCATTT AGATGAGCCA AAAACAACAC AGTACATGTA TTGGTTAAAA GGCGTTGTAA CAGAAGGGTC TTTAGGAGAA TCTTTTTACT ATAAAAGACC AGTTTCAGAA GTAATGAAAG ACTTTATACC AAATTCCTTT ATTTTAGGAG CGGCATCACT AATTTTGGGG CTTATAATTG CGGTGCCAAT AGGTATAGTT TCAGCAACAA AGCAATATTC ATTCTTTGAT AAATTTTTTA CGGTATTTGC CCTTATGGGA ATATCAATGC CATCATTTTT CTTTGGACTT ATATTAATTA AATATTTAGG AGTTCAATTT AATTTATTTC CAATATCGGG TATGACTACT CCAGGAAGTG CATATACAGG AATGCAATAT ATTTTAGACG TATTAAAACA TATGATTTTA CCACTTATAG TTTTAACTCT TGGAAGTGTA GGTGGATGGA TGAGATACAC AAGATCAAGT ATGCTTGAGG TAGTTAGACA AGATTATATA AGAACTGCTA GGGCAAAAGG ATTAAAAGAG AAGGTAGTTA TATATAAACA TGCTTTAAGA AATGCACTTA TACCAGTTGT AACACTATTA GGAATGTCAA TTCCAGGATT ATTCTCAGGT GCTACATTAA CAGAAAAAAT ATTTAACTGG CCAGGAATAG GTCCAGTACA GTTAAGTGCA GTTAATAACA GAGATTATTA TCTACTTATG GGTATAAACC TTACTTTGGC TATATTAGTT TTAATAGGAA ACTTACTTGC TGATATTATA TATGCATTAG TAGACCCAAG AATAAGGCTT AAGTAG
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Protein sequence | MLQYITRRIL LIIPTIVGVS LVLFFIFAMA PGDAITANMD PNMSVETKQA IREKYHLDEP KTTQYMYWLK GVVTEGSLGE SFYYKRPVSE VMKDFIPNSF ILGAASLILG LIIAVPIGIV SATKQYSFFD KFFTVFALMG ISMPSFFFGL ILIKYLGVQF NLFPISGMTT PGSAYTGMQY ILDVLKHMIL PLIVLTLGSV GGWMRYTRSS MLEVVRQDYI RTARAKGLKE KVVIYKHALR NALIPVVTLL GMSIPGLFSG ATLTEKIFNW PGIGPVQLSA VNNRDYYLLM GINLTLAILV LIGNLLADII YALVDPRIRL K
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