Gene CPR_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2257 
Symbol 
ID4205585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2474188 
End bp2475153 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content32% 
IMG OID642566809 
Productoligopeptide ABC transporter, permease component 
Protein accessionYP_699533 
Protein GI110803345 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACAGT ATATCACTAG AAGAATACTA TTAATAATAC CGACTATTGT TGGCGTATCA 
TTAGTACTTT TCTTCATATT TGCTATGGCT CCAGGAGATG CTATTACAGC AAATATGGAT
CCAAATATGA GTGTAGAAAC AAAACAAGCA ATAAGAGAAA AATATCATTT AGATGAGCCA
AAAACAACAC AGTACATGTA TTGGTTAAAA GGCGTTGTAA CAGAAGGGTC TTTAGGAGAA
TCTTTTTACT ATAAAAGACC AGTTTCAGAA GTAATGAAAG ACTTTATACC AAATTCCTTT
ATTTTAGGAG CGGCATCACT AATTTTGGGG CTTATAATTG CGGTGCCAAT AGGTATAGTT
TCAGCAACAA AGCAATATTC ATTCTTTGAT AAATTTTTTA CGGTATTTGC CCTTATGGGA
ATATCAATGC CATCATTTTT CTTTGGACTT ATATTAATTA AATATTTAGG AGTTCAATTT
AATTTATTTC CAATATCGGG TATGACTACT CCAGGAAGTG CATATACAGG AATGCAATAT
ATTTTAGACG TATTAAAACA TATGATTTTA CCACTTATAG TTTTAACTCT TGGAAGTGTA
GGTGGATGGA TGAGATACAC AAGATCAAGT ATGCTTGAGG TAGTTAGACA AGATTATATA
AGAACTGCTA GGGCAAAAGG ATTAAAAGAG AAGGTAGTTA TATATAAACA TGCTTTAAGA
AATGCACTTA TACCAGTTGT AACACTATTA GGAATGTCAA TTCCAGGATT ATTCTCAGGT
GCTACATTAA CAGAAAAAAT ATTTAACTGG CCAGGAATAG GTCCAGTACA GTTAAGTGCA
GTTAATAACA GAGATTATTA TCTACTTATG GGTATAAACC TTACTTTGGC TATATTAGTT
TTAATAGGAA ACTTACTTGC TGATATTATA TATGCATTAG TAGACCCAAG AATAAGGCTT
AAGTAG
 
Protein sequence
MLQYITRRIL LIIPTIVGVS LVLFFIFAMA PGDAITANMD PNMSVETKQA IREKYHLDEP 
KTTQYMYWLK GVVTEGSLGE SFYYKRPVSE VMKDFIPNSF ILGAASLILG LIIAVPIGIV
SATKQYSFFD KFFTVFALMG ISMPSFFFGL ILIKYLGVQF NLFPISGMTT PGSAYTGMQY
ILDVLKHMIL PLIVLTLGSV GGWMRYTRSS MLEVVRQDYI RTARAKGLKE KVVIYKHALR
NALIPVVTLL GMSIPGLFSG ATLTEKIFNW PGIGPVQLSA VNNRDYYLLM GINLTLAILV
LIGNLLADII YALVDPRIRL K