Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2256 |
Symbol | |
ID | 4206022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2473259 |
End bp | 2474173 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566808 |
Product | oligopeptide ABC transporter, permease component |
Protein accession | YP_699532 |
Protein GI | 110803888 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAG AATTAAATAA AGAAGTTAAA GTGAAAAAAG AGAAAATAGA AAGCCCTTGG ACTGTAGCTT TTAAAAGATT GAAAAAAAAT AAGTTAGCTT TAGGTGGCTT ATTTATATTG TTGGTCTTAG TTTTAATTTC AATATTAGGA CCAATGTTAT ATCCACATGA TCATTTAACA ATAGATTTAG TAAGAACTAA TCAACCACCA TCAGCACAGC ATTGGCTAGG AACTGATGAA TCTGGAAGAG ATGTTTTAGC TAGACTTATG TACGGGGGAA GATATTCACT TTCAATAGGT ATAGTTGCGG TAGGAATTTC TATAATTATA GGAACAACTT TAGGGATATT AGCAGGATAT TATGGAGGAT TTATAGATAG TTTAATTATG AGGATTGTTG ACGTATTTAT GTGTTTCCCA TTCTTATCAT TATTAATAAT GGTATCTGCT ATAATGTCAG ATTTAAAAAT ACCACCAGAG TATAGAATTT TTGTAGTTAT GTTTATTATA GGGGCGCTGA GTTGGACTGG TACATGTCGT ATGGTTAGAG GTATGGTCTT ATCTTTAAGA GAACAAGAAT TTATGCAAGC GGCAGAAGCT TTAGGTCTAT CAGATGCTAG AAAAATGTTT TTACACTTAT TACCTAATAC ATTAGCAGTT ATTATAGTTT CAGCTACATT AGGAATTGGT GGAGCTATAT TAACAGAATC ATCTTTAAGT TTCTTAGGTC TTGGAGTTAC ACCTCCTACA CCAACTTGGG GTAATATGAT ACAAACAGCT CAAGATTACT ATACATTAAC AAATAGATGG TGGTTATGGA TACCTCCAGG AGTATGTATA TTCTTAACTG TTATATCTAT AAATATTTTT GGAGATGGAT TAAGAGATGC TCTAGATCCT AAGCTAAAGG TCTAA
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Protein sequence | MQTELNKEVK VKKEKIESPW TVAFKRLKKN KLALGGLFIL LVLVLISILG PMLYPHDHLT IDLVRTNQPP SAQHWLGTDE SGRDVLARLM YGGRYSLSIG IVAVGISIII GTTLGILAGY YGGFIDSLIM RIVDVFMCFP FLSLLIMVSA IMSDLKIPPE YRIFVVMFII GALSWTGTCR MVRGMVLSLR EQEFMQAAEA LGLSDARKMF LHLLPNTLAV IIVSATLGIG GAILTESSLS FLGLGVTPPT PTWGNMIQTA QDYYTLTNRW WLWIPPGVCI FLTVISINIF GDGLRDALDP KLKV
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