Gene CPR_2202 details

Gene Information

• Locus tag: CPR_2202
• Symbol: gcp
• ID: 4204126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2431480
• End bp: 2432499
• Gene Length: 1020 bp
• Protein Length: 339 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642566752
• Product: putative DNA-binding/iron metalloprotein/AP endonuclease
• Protein accession: YP_699502
• Protein GI: 110801551
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0533] Metal-dependent proteases with possible chaperone activity
• TIGRFAM ID: [TIGR00329] metallohydrolase, glycoprotease/Kae1 family

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA AAATTATATT AGCAATAGAA AGTAGTTGTG ACGAAACAGC GGCAGCTGTA 
GTAGTCAATG GTAGAGAAGT TTTATCAAAT ATAATATCTT CTCAGATAGA TATACATACA 
AAATTTGGAG GAGTAGTTCC AGAGGTTGCA TCAAGAAAAC ACATAGAAGC TATAAATGCA 
GTGGTAGAGG AAGCCTTAGA AGTTGCTGGA GTAACATTTG ATGACATAGA TGCAATAGCA 
GTTACATATG GTCCAGGTTT AGTTGGAGCA CTTTTAGTAG GACTTCAATA TGCTAAAGGA 
TTAGCATACT CTTTAGATAA ACCATTAATA GGAGTTAATC ATATAGAAGG GCATATAAGT 
GCTAACTTTA TAGATCATAA GGACTTAGAG CCACCTTTTG TTTGCTTAGT TGTTTCAGGA 
GGACATACTT TTGTAGTCCA TGTTGAAGAC TATGGAAAGT TTGAAATAAT AGGCGAAACA 
AGAGATGATG CAGCAGGAGA AGCTTTTGAT AAGGTAGCAA GAGCCGTAGG ATTAGGATAT 
CCAGGAGGTC CTAAAATAGA TAAATTAGCT AAGGAAGGAA ATAGTGATGC TATAAAATTC 
CCAAAAGCTA ATTTCCATGA TGATAACTTA GATTTTTCAT TTAGTGGAGT TAAATCAGCT 
GTCTTAAATT ATCTAAATAA GATGGAAATG AAAAATGAAG AAATAAATAA AGCTGATGTT 
GTAGCTAGTT TCCAAAAGGC CGTAGTTGAA GTGTTAACTG ATAATGCAAT AAAAACTTGT 
AAAATGAGAA AGGCAGATAA AATAGCCATT GCAGGTGGAG TTGCTTCTAA TAGTGCTTTA 
AGAGAAAACC TTCTTAGAGA AGGAGAAAAG AGAGGAATAA AGGTTTTATT CCCATCACCA 
ATACTTTGTA CAGATAATGC TGCCATGATA GGAAGTGCTG CATATTTTGA ATTATTAAAG 
GGAAATATAT CTAAAATGAG TCTTAACGCA AAACCTAATT TAAGATTAGG AGAAAGATAG 

 

Protein sequence

MNKKIILAIE SSCDETAAAV VVNGREVLSN IISSQIDIHT KFGGVVPEVA SRKHIEAINA 
VVEEALEVAG VTFDDIDAIA VTYGPGLVGA LLVGLQYAKG LAYSLDKPLI GVNHIEGHIS 
ANFIDHKDLE PPFVCLVVSG GHTFVVHVED YGKFEIIGET RDDAAGEAFD KVARAVGLGY 
PGGPKIDKLA KEGNSDAIKF PKANFHDDNL DFSFSGVKSA VLNYLNKMEM KNEEINKADV 
VASFQKAVVE VLTDNAIKTC KMRKADKIAI AGGVASNSAL RENLLREGEK RGIKVLFPSP 
ILCTDNAAMI GSAAYFELLK GNISKMSLNA KPNLRLGER