Gene CPR_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2176 
SymbolprfA 
ID4205579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2401653 
End bp2402735 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content33% 
IMG OID642566726 
Productpeptide chain release factor 1 
Protein accessionYP_699476 
Protein GI110802815 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.28118e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTTG ATAGATTAAA TTTTATTGAA AATAAATATG ATGAACTTTC AGTTAAGATT 
AGTGATCCTT CAATAATGGC TAACCAAAAA GAGTGGAGAA AGCTTTGTAA GGAGCACGCT
GACTTAGAAG TTATAGTTAA TAAGTACAAA GAGTACAAAG AAGCGACAGA AGAATTAGAA
GCTAACAAAG AGATGCTTTC AGAAGAAAGT GATCAAGAAA TGAGAGAAAT GATAAACTCT
GAAATCAAGG ACTTAACAGA ACGAAAAAAA GAATTAGAGG ACGAAATACA AATTCTTTTA
CTACCAAAAG ATCCTAATGA TGATAAAAAC GTATTTGTTG AAATCAGAGG TGGTGCTGGT
GGAGATGAAG CAGCACTATT TGCAGCTAAT CTTTTCAGAA TGTACACTAA ATACGCTGAA
AAGAATAGAT GGAAAGTTGA ACTAATGAGT GCAAATGAAA CTGACATTGG AGGTTTCAAA
GAGGTTGTAT TCATGATAAA AGGAGCAGGT GCTTATTCAA AACTTAAATA TGAGAGTGGA
GCACACAGAG TTCAAAGGGT TCCTGATACA GAAAGTTCAG GAAGAATACA TACTTCAACT
GCTACAGTAG CTGTTTTACC AGAAGTTGAT GATGTAGAAA TTGAAATAAA CGATAAAGAT
ATTAAAATAG ACGTATTTAG AGCATCAGGT AATGGTGGTC AGTGCGTTAA CACAACTGAT
TCAGCTGTAA GAATAACTCA CTTACCTTCA GGATTAGTTG TTTCATGTCA GGATGAAAAA
TCACAGCTTA AAAATAAAGA AAAAGCTATG AAAGTATTAA GAGCAAGATT ATTCGAGCAA
GCTGAAGCTG AAAGATTAGC TGGTATTGCT GAAGATAGAA AGAGTCAGGT TGGTACTGGA
GATAGAAGTG AAAGAATAAG AACTTACAAC TATCCACAAG GAAGAGTAAC TGATCACAGA
ATAAACATGA CTTTATATAA ACTAGATAGT TTCTTAGAAG GTGACATAGA CGAAATATTA
AATGCTCTAA TTACTGAAGA TCAAGCTCAA AAGATGAAAG CAATGGGTAA TACTGAATTT
TAA
 
Protein sequence
MILDRLNFIE NKYDELSVKI SDPSIMANQK EWRKLCKEHA DLEVIVNKYK EYKEATEELE 
ANKEMLSEES DQEMREMINS EIKDLTERKK ELEDEIQILL LPKDPNDDKN VFVEIRGGAG
GDEAALFAAN LFRMYTKYAE KNRWKVELMS ANETDIGGFK EVVFMIKGAG AYSKLKYESG
AHRVQRVPDT ESSGRIHTST ATVAVLPEVD DVEIEINDKD IKIDVFRASG NGGQCVNTTD
SAVRITHLPS GLVVSCQDEK SQLKNKEKAM KVLRARLFEQ AEAERLAGIA EDRKSQVGTG
DRSERIRTYN YPQGRVTDHR INMTLYKLDS FLEGDIDEIL NALITEDQAQ KMKAMGNTEF