Gene CPR_2161 details

Gene Information

• Locus tag: CPR_2161
• Symbol: atpC
• ID: 4204789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2388419
• End bp: 2388820
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642566711
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_699461
• Protein GI: 110802246
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAT TTAAGTTAAT TGTTACAACA CCAGAAAGAG TTCTTATTTC AGGTGAAGTT 
TCAAGAGTCT TATGTAAAAA TGCTGTTGGT GAGTTTGAAA TATTAGCTGG TCACCAACCT 
TATTTAACAG CAACTGTTCC TACTGTTACA AGAATAGATG ATGAGAATGG TGAAAGTAAA 
TACTTATTTA CTTCAACAGG ATTAATGAAG GTTCAAAATA ATGAAGTTAC TTTTTGTGTA 
AATTCAGCAG AATGGCCTGA AGAAATCGAT GAGGCAAGAG CTATGAATGC TAAGCAAAGA 
GCAGAGGAAA GATTAAAAAA TAAGACTGAT GAATTAGATA AAAAGAGAGC TAAGTTAGCC 
TTAGCAAGAG CTATGTCTAG ATTAAAGTTA AAAGAAATGT AA 

 

Protein sequence

MNKFKLIVTT PERVLISGEV SRVLCKNAVG EFEILAGHQP YLTATVPTVT RIDDENGESK 
YLFTSTGLMK VQNNEVTFCV NSAEWPEEID EARAMNAKQR AEERLKNKTD ELDKKRAKLA 
LARAMSRLKL KEM