| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2158 |
|---|
| Symbol | spoIID |
|---|
| ID | 4206556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2385178 |
|---|
| End bp | 2386200 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642566708 |
|---|
| Product | stage II sporulation protein D |
|---|
| Protein accession | YP_699458 |
|---|
| Protein GI | 110801807 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2385] Sporulation protein and related proteins |
|---|
| TIGRFAM ID | [TIGR02669] SpoIID/LytB domain
[TIGR02870] stage II sporulation protein D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATA GAAAAATTTT AGAATCAGTA ACTTTTATTG TAACAATTAT AGTGAGTATA
GTTTTTATAC CAATACTTTT TGGTTTTTTA TCTAGTTCAA GTATGGCTGA AAGTAATAAT
AAAGTAGAGA AAGTTAAAAA TAAAAAGTTA GTTGATGTAG TTAACTTAAA GGAAGTTGAA
GTTTACATAT CTAAAGAAAA TAAAGTGGAA AAAGTACCAT TAGAGGAATA TGTCTTATCT
GTAGTTTCAA GTGAAATGCC AGCTACTTTT CATGAAGAGG CATTGAAAGC TCAGTCTATT
TTAGCAAGGA CATTTGTTAT AAATAAATTA ATTACTGGAT GTAACAATAT AAAGGAAGGA
AATATATGTG ATACTACTCA TTGTCAAGCA TATTTAAATG TTAATGAAAA GAAAAAAGCT
TGGGGTAAAG ATGGGGATGA ATATTTAAAA AAAATAAAAA AAGTTGTTAA AGAAACAGAG
GGGAAAGTTC TATCATATAA TGATAAGTTA GTAAAATATC CTCAATATTT TTCTACAAGT
TCAGGAAATA CAGAGGATGC AGTTGCTGTA TTTTCAGAAG ATGTACCTTA CTTAAAGTCA
GTTGAAAGTC CAGGGGAAGA AATATCACCT AAATATGAGA GTGAAATCAG TATTTCTATA
AGTGATTTTA AGAGTAAAAT TAAAAAATCT ATTTCTAATA GTGATTTAGG AAATAATATA
ACTGAAGAAG TTAAAATATT AAATAGGAAC ACAGGAGGAA CTGTAAATGA CATAAAAATA
GGGAAAGCTA CCATTAAGGG GAAAGAATTT AGAAAAATAT TTGGACTAAA TTCTGCCAAT
TTTACATTGG AAGTTTTAGA TGATAACATA AAAATAAAAT GTTTAGGATA TGGACATGGT
GTTGGTATGA GTCAATGGGG AGCTAATGTA ATGGCAAAGG AAGGCAGTAA ATATGATGAA
ATATTAGAAC ATTATTTTAA AGGAAGTAAA ATTGAAGAAA GTAATAAAAT TTTAATAGAG
TAA
|
|---|
| Protein sequence | MINRKILESV TFIVTIIVSI VFIPILFGFL SSSSMAESNN KVEKVKNKKL VDVVNLKEVE
VYISKENKVE KVPLEEYVLS VVSSEMPATF HEEALKAQSI LARTFVINKL ITGCNNIKEG
NICDTTHCQA YLNVNEKKKA WGKDGDEYLK KIKKVVKETE GKVLSYNDKL VKYPQYFSTS
SGNTEDAVAV FSEDVPYLKS VESPGEEISP KYESEISISI SDFKSKIKKS ISNSDLGNNI
TEEVKILNRN TGGTVNDIKI GKATIKGKEF RKIFGLNSAN FTLEVLDDNI KIKCLGYGHG
VGMSQWGANV MAKEGSKYDE ILEHYFKGSK IEESNKILIE
|
|---|
| |