| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2121 |
|---|
| Symbol | |
|---|
| ID | 4205690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2348328 |
|---|
| End bp | 2349230 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 642566671 |
|---|
| Product | exonuclease family protein |
|---|
| Protein accession | YP_699430 |
|---|
| Protein GI | 110803333 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTATG TAATAATAGA CCTAGAATTT AATAATATGC AAAATATTAC AAAATTTTAT
CCTAATATTT ATAATGAGCA GAAAGATTTA AAGGAATTAG ATTCCTATAA TGAAATAATA
GAGATTGGGG CTATAAAATT AAATAAGTTC ATGCAAGAAG TAGATGAGTT TAAGACATAT
ATTAAACCAT CAGTATTTAA GGTTTTAAAT CCAAAGATAA TAGATATAAC AGGAATAACT
GAAGATCATT TAAAAGATGG AATTAAATTT GAAGATGCCA TGGACAACCT TAAAGATTTT
ATTGGGGAAG ATGATATACT TTGTTCATGG GCCACTGATG ATATTGTTCA TATAGTTAAT
AATGCTAAGT ATCATTCATA CAAAAATATA AGTTGGATAA AAAAATATAT TGATATACAA
AAATATTGCA CAAAGATATT AGCGCATAAA AAATCTTTAA GCTTAAAACA TGCTTTAGAA
GAGTTAAAGA TAAAAATTGA TAAAAGTAAA CTACATGATG CACTAAATGA TGCTGTTTAT
ACGGCAGAGG TTTTTAAAAG ATTATATAAT GGTAAAAAGG TAAAAGAATA TATAGTAGAA
GATGTTTACA ATATGCCTTC TATAAGGGTT AAAGATTTAA ATAATTATAA TTTAGAATGT
GAAGATATAG AATTTAAATG CCCTAAATGT AATATTAAAG TTGAAATGGA CCATCCTTTT
AGATTATTTA GTTGGAGATT TGTATCAATA GGAAAATGTC CAAAATGCAA TAGAAATGTT
CGACAAGAGG TTGTACTAAA AAAGACCTTA TCAGGCAATT TAGTTTATGA ATCTACAAAC
TCTTTAATAA ATGACACAGA ATACATTGAT CTTGACTATA AATTTAAAAA GTTAGCTAAA
TGA
|
|---|
| Protein sequence | MGYVIIDLEF NNMQNITKFY PNIYNEQKDL KELDSYNEII EIGAIKLNKF MQEVDEFKTY
IKPSVFKVLN PKIIDITGIT EDHLKDGIKF EDAMDNLKDF IGEDDILCSW ATDDIVHIVN
NAKYHSYKNI SWIKKYIDIQ KYCTKILAHK KSLSLKHALE ELKIKIDKSK LHDALNDAVY
TAEVFKRLYN GKKVKEYIVE DVYNMPSIRV KDLNNYNLEC EDIEFKCPKC NIKVEMDHPF
RLFSWRFVSI GKCPKCNRNV RQEVVLKKTL SGNLVYESTN SLINDTEYID LDYKFKKLAK
|
|---|
| |