| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2097 |
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| Symbol | rplU |
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| ID | 4204137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2323301 |
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| End bp | 2323612 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642566647 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_699406 |
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| Protein GI | 110802667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000174433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGCAG TATTAACTAC AGGAGGAAAA CAATACAGAG TTCAAGAAGG AGACGTATTA
TTCGTTGAAA AACTTAACGC TGAAGTTGAC TCAACAGTTG AATTAACAGA AGTTCTTGCA
GTCGCTAAAG ACGGAGAAAT CAAAGTTGGT GCACCAGTAG TTGAGGGTGC TAAGGTTGTA
GCAAAAGTAT TAGCTCAAGG AAAAGCTAAG AAAGTTGTTG TATTCAAATA CAAAAGAAAG
AAAGACTACA GAAGAAAAAA TGGTCACAGA CAACCTTACA CTAAGATCGT TATCGAAAAG
ATCGAAGCTT AA
|
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| Protein sequence | MYAVLTTGGK QYRVQEGDVL FVEKLNAEVD STVELTEVLA VAKDGEIKVG APVVEGAKVV
AKVLAQGKAK KVVVFKYKRK KDYRRKNGHR QPYTKIVIEK IEA
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