| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2089 |
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| Symbol | |
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| ID | 4205871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2317430 |
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| End bp | 2318326 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566639 |
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| Product | pseudouridylate synthase family protein, yabo |
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| Protein accession | YP_699398 |
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| Protein GI | 110802739 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTT TAGAAAGTAA AATAACTAAA GAGTATGATA AAAGAAAAAT AAGAGAATTT
TTAAAAGAAG AGTTAGGATT ATCTTCAAGA TTAATAAGAA GTGCAGCTAT AGACAAGAGA
ATTAAGGTAG ATGGTGTTGC TGTAAAGATG AACTATGTTG TTAAAACTGG TGAAGAGATA
AAAATTGAGC TTTCAAAAAA GGAATCTCAA AATATTGAAC CAGAAAAAAT GGATATAGAA
ATAGTTTATG AGGATAGTGA CATATTAGTT TTAAATAAGA AACCTTTTAT GGTTGTACAT
CCTACAAGAA GCCATCCTAA TGGAACTTTA GCTAATGGTA TATTATATTA CTTTAAAGAG
AGTAATCAAG ATTGTATAGT TAGACTAGTT AGTAGATTAG ATATGAATAC TTCAGGACTT
ATAATCATAG GTAAAAATCA ATATGCTCAT ATGGTTTTAT CTAATGAAAT GAAAACTGAT
AAATTTCAAA AAAGATATTT AGCTATAGTT CATGGAAATT TAGAAGAAAA AGAAGGAACT
ATCAATAGAC CAATTTATAG ACCAGCAGAG GACACTATAA AAAGGGTTGT AGATGAAAGA
GGGCAAGAGA GTATAACTCA TTATAAGGTT ATAGAAAGTT ATAATGGTGC CGATTTAGTT
GAATGTTTAT TAGAAACTGG GAGAACACAT CAGATAAGAG TGCATCTAAG TAGTTTAGGT
CATCCTATAT TTGGAGACTC TTTATACGGA ACAGAGGATG AAGAGTTTAT ATCAAGACAG
GCACTTCATG CCTATGGATT AGATTTTTAT AGTCCAAAGA CAAAGAAGTC TTTAAGCTTA
AGGGCAGATC TTCCAGAGGA TATGAAAGAG TTAATAAATA AATTAAAAAA CAAGTAG
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| Protein sequence | MSILESKITK EYDKRKIREF LKEELGLSSR LIRSAAIDKR IKVDGVAVKM NYVVKTGEEI
KIELSKKESQ NIEPEKMDIE IVYEDSDILV LNKKPFMVVH PTRSHPNGTL ANGILYYFKE
SNQDCIVRLV SRLDMNTSGL IIIGKNQYAH MVLSNEMKTD KFQKRYLAIV HGNLEEKEGT
INRPIYRPAE DTIKRVVDER GQESITHYKV IESYNGADLV ECLLETGRTH QIRVHLSSLG
HPIFGDSLYG TEDEEFISRQ ALHAYGLDFY SPKTKKSLSL RADLPEDMKE LINKLKNK
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