Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2088 |
Symbol | |
ID | 4205805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2316115 |
End bp | 2317398 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566638 |
Product | D-alanyl-D-alanine carboxypeptidase family protein |
Protein accession | YP_699397 |
Protein GI | 110802740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTTTA TCTTCTCTTT AATTTTAAGT ACTAATGTTT TTGCTGAAAG TAATGTACCT GAAATTAAAG GTGAAGGAAT GGTTCTTATG GATGGGACTA CAGGTGAGGT TTTAGCTGAA AAAAATGCTA ATGAAAAACT TGCTCCTGCA TCTACTACTA AAACTATGAC AGCTTTACTT ACAGTAGAAA AAGCTAATTT AAATGATATT GTTACTATAG GAAAGAATCC TCCTTTAGCT GAAGGAACCC GTGTTGGTCT TCAAGAAGGA GATAAATATA CAGTTGAAGA ATTACTTAAT GCATTATTAA TACAATCAGC TAATGATGCT GCTGTAGCTT TAGCTGAACA TATTTCTGGC TCCGAAGGAG AATTTGCAAA ACTTATGAAT GAGCGTGCAG AAGAATTAGG CGCTAAAAAT ACTCACTTTG TTAATGCTAG TGGACTTTTT GAAGATGATC ATATGACTAC TCCTTATGAT CTAGCTTTAA TAATGAATGC CGCTTCAAAG AATCCAATAA TTGATGAAAT TACAAAAAAA ACAGTTTATG AAATGCCTAA AAGCATTGTA AGTGGAGAAC CTATATGGGC AAATAATAAT AATAAACTTA TTCACCAAAC AAGCCCATAT TATAATAAAG ATATTTTTTG TAACAAAACA GGATATACAA CTAAATCAAG GCATACATTT ACTTGTGCAG CTAAAAGAGG TGATAGAAAA TTAATTCTTA CCCTACTAGG TTATGACACT AAGGATCAAT ACTATGAAGA TACAAAAAAT CTTTTAGATT ATGGATTTAA TAATTTCTCT TTAGTTAAAT TATATTCTAA AAATGATGTT ATAAAAGAAT ACTATATTGA TGATAAAAAT AACTTATCTT TATTAGCTCC TGAAGATATT TACAAAACAT TTAAGAACTC TGAAATAGAG AACTTATCTA CAGATGAAAT AAAGAAAAAT TTTAACATAG ACTTTTCAGT AAAAGCAACT AAACCTATAT CTAGGGGTGC TGACATATTA AAGGATACTG ATTCTTTTAC TGGAATACTT ATGATTGGAA ATACTCCTTA TAAAACCTTA AATCTTTTAA ATAGTAATGA TATAACTTAT ACAAGTTTTG AAAAAATTAT GTTTAAACTA AAGGGTTTTA GTGGATTTTA CATAGCTTTA GGTGTTATAG GTTTAATATT TTTAATAATC TTAATACTAT TTATGATTAG ACTTATATCA ACTATAAAAA GAATAAGAAA TAGAAAAAAA CGTAATTCAT ATTTTTATAA TTAA
|
Protein sequence | MAFIFSLILS TNVFAESNVP EIKGEGMVLM DGTTGEVLAE KNANEKLAPA STTKTMTALL TVEKANLNDI VTIGKNPPLA EGTRVGLQEG DKYTVEELLN ALLIQSANDA AVALAEHISG SEGEFAKLMN ERAEELGAKN THFVNASGLF EDDHMTTPYD LALIMNAASK NPIIDEITKK TVYEMPKSIV SGEPIWANNN NKLIHQTSPY YNKDIFCNKT GYTTKSRHTF TCAAKRGDRK LILTLLGYDT KDQYYEDTKN LLDYGFNNFS LVKLYSKNDV IKEYYIDDKN NLSLLAPEDI YKTFKNSEIE NLSTDEIKKN FNIDFSVKAT KPISRGADIL KDTDSFTGIL MIGNTPYKTL NLLNSNDITY TSFEKIMFKL KGFSGFYIAL GVIGLIFLII LILFMIRLIS TIKRIRNRKK RNSYFYN
|
| |