Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2057 |
Symbol | |
ID | 4205427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2277720 |
End bp | 2279456 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642566607 |
Product | sensor histidine kinase |
Protein accession | YP_699366 |
Protein GI | 110802162 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTTTA GTAAGTCAAA TCTTTATAAG AGACTATTTG TAACATATAC AATAGTTATA TTATCCGTAG TTAGTATTTT ATGCATTTAC TTCTTAAGTA AAACTTCTGA AGAGATTAAG AGAAATAATC TTTATTTAAA TGATAAAATA CTACAAGATG TAAATGAAAC CCTAGAGTAT AATAGCAGCA CATCAAGAAG AATAATGAAT ATGCTCTATG AAGATGACTT TAGGTTAAAT GATGTTATAA AGTATTTAAA TTCAGATTTA GTTGATTATA TAAAAGGAAA ATTAGATTAT TATAGTGCAA GTGATAAACT TTATTATAAT GGTATAGAAA GCTTTGTTAA GAGTTCATTT CAATTAAACA ACTTTTTAAA AAGTATATCC TTTATAAGTT ATTCTAGAAA TGAAATATCA GTTTTTAATA GAAAGGGAGA AATAAAGACC TATCCTTTTA ATTCAAATGA ATTATTAGAC AAAAAGGATA TTGAATATGC AATCTATAAT AAAAATGAAA TTAGTATAAT AAATGAAATA AGAGATGCAG CTTCTTTAAA GCCAGAAGGA ATACTTATGA CTACTTACGA TATAGGGATA ATTAGTGATG TTATAAAAAA ATATAAGGAT ACAAATTCAG AGGTTCTTAT ATTAAATAAA GAAGGAATGA TTTTATATGA TTCAGAAAAT AAATATGATT ATGAGTATTA TCCATACTTT GATAAGCTTA AAGTAGGGCG TCATGAGATT TTATTAGAAG ATAGTTATTA TGTAGATATA TTACCAGATA ACAATGGATT AATGTCTTTA GTGAGAATAA AAGTAAGTAA TGCTACAAAA GTACCTATTC TTTTTAAAGT TTCAGCACTC TTAGTTAGTT TATTATTATT TATAATTGCA GAGTGTGTTC TTTATATAAA ATTTAAAAAT TTAAGTAGTA GAATGGATTC TCTTGTTTTA GCCATGGAAA AGGTTGAAAA AGGAGATATA GATGTTCATA TTCCTTTAAG TAAGGATAGA GATGAAATAA CATTTATTGC AGATAATTTT AATAAAATGT GTGAAAAGTT AAATGATCAT ATAAGAAAGA GTTACTTAGC AGAACTACGT CAAAGAGAGG CTGAAATTGT AGCTCTTCAA AATCAAATTA ACCCACATTT TCTTTATAAT ACACTAGAGT CAATAAGGAT GAAGGCAATA TGTAATGGAG ATAAAGAAGT AGGGAAAATG CTTTATAGCT TAGCATTTTT ATTTAGAAGT CAAGTAAAGG GAAATCTTAT AGTTTCAATA GATCAGGAAA TAAAATACTG TAATAAATAT TTAGAGCTAT TTAAGTTTAG ATATGATGAG AAATTTAAGT TTAAAATAGA ATGTGAAGAG GATTTATATG ATAAGGGAAT TGTTAAATTT ACTCTTCAAC CTTTAATTGA AAACTATTTT GTTCATGGTA TAAGGTTAGA AAGAGATGAT AATGAATTAA AAATATATAT CTATAAACAT TTAGAAGATA TAGTTGTGGA AGTAATTGAC AATGGTAGAG GAATTACTAA GGAGAAATTA GATGATATAA ATAGAAGGAT TAGGGAATGC GATCATTCTG GTAAATCAAT AGGGATGCTA AATGTTCATG AAAGGATTAA AATTAAATAT GGGGAACCTT ACGGGTTAAC TGTTACTAGT GAGGAGAATA AGGGAACTAA TATGATTTTA AAATTCCCGC TTAGAGAGGT GGAGTAG
|
Protein sequence | MKFSKSNLYK RLFVTYTIVI LSVVSILCIY FLSKTSEEIK RNNLYLNDKI LQDVNETLEY NSSTSRRIMN MLYEDDFRLN DVIKYLNSDL VDYIKGKLDY YSASDKLYYN GIESFVKSSF QLNNFLKSIS FISYSRNEIS VFNRKGEIKT YPFNSNELLD KKDIEYAIYN KNEISIINEI RDAASLKPEG ILMTTYDIGI ISDVIKKYKD TNSEVLILNK EGMILYDSEN KYDYEYYPYF DKLKVGRHEI LLEDSYYVDI LPDNNGLMSL VRIKVSNATK VPILFKVSAL LVSLLLFIIA ECVLYIKFKN LSSRMDSLVL AMEKVEKGDI DVHIPLSKDR DEITFIADNF NKMCEKLNDH IRKSYLAELR QREAEIVALQ NQINPHFLYN TLESIRMKAI CNGDKEVGKM LYSLAFLFRS QVKGNLIVSI DQEIKYCNKY LELFKFRYDE KFKFKIECEE DLYDKGIVKF TLQPLIENYF VHGIRLERDD NELKIYIYKH LEDIVVEVID NGRGITKEKL DDINRRIREC DHSGKSIGML NVHERIKIKY GEPYGLTVTS EENKGTNMIL KFPLREVE
|
| |