Gene CPR_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2057 
Symbol 
ID4205427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2277720 
End bp2279456 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content26% 
IMG OID642566607 
Productsensor histidine kinase 
Protein accessionYP_699366 
Protein GI110802162 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA GTAAGTCAAA TCTTTATAAG AGACTATTTG TAACATATAC AATAGTTATA 
TTATCCGTAG TTAGTATTTT ATGCATTTAC TTCTTAAGTA AAACTTCTGA AGAGATTAAG
AGAAATAATC TTTATTTAAA TGATAAAATA CTACAAGATG TAAATGAAAC CCTAGAGTAT
AATAGCAGCA CATCAAGAAG AATAATGAAT ATGCTCTATG AAGATGACTT TAGGTTAAAT
GATGTTATAA AGTATTTAAA TTCAGATTTA GTTGATTATA TAAAAGGAAA ATTAGATTAT
TATAGTGCAA GTGATAAACT TTATTATAAT GGTATAGAAA GCTTTGTTAA GAGTTCATTT
CAATTAAACA ACTTTTTAAA AAGTATATCC TTTATAAGTT ATTCTAGAAA TGAAATATCA
GTTTTTAATA GAAAGGGAGA AATAAAGACC TATCCTTTTA ATTCAAATGA ATTATTAGAC
AAAAAGGATA TTGAATATGC AATCTATAAT AAAAATGAAA TTAGTATAAT AAATGAAATA
AGAGATGCAG CTTCTTTAAA GCCAGAAGGA ATACTTATGA CTACTTACGA TATAGGGATA
ATTAGTGATG TTATAAAAAA ATATAAGGAT ACAAATTCAG AGGTTCTTAT ATTAAATAAA
GAAGGAATGA TTTTATATGA TTCAGAAAAT AAATATGATT ATGAGTATTA TCCATACTTT
GATAAGCTTA AAGTAGGGCG TCATGAGATT TTATTAGAAG ATAGTTATTA TGTAGATATA
TTACCAGATA ACAATGGATT AATGTCTTTA GTGAGAATAA AAGTAAGTAA TGCTACAAAA
GTACCTATTC TTTTTAAAGT TTCAGCACTC TTAGTTAGTT TATTATTATT TATAATTGCA
GAGTGTGTTC TTTATATAAA ATTTAAAAAT TTAAGTAGTA GAATGGATTC TCTTGTTTTA
GCCATGGAAA AGGTTGAAAA AGGAGATATA GATGTTCATA TTCCTTTAAG TAAGGATAGA
GATGAAATAA CATTTATTGC AGATAATTTT AATAAAATGT GTGAAAAGTT AAATGATCAT
ATAAGAAAGA GTTACTTAGC AGAACTACGT CAAAGAGAGG CTGAAATTGT AGCTCTTCAA
AATCAAATTA ACCCACATTT TCTTTATAAT ACACTAGAGT CAATAAGGAT GAAGGCAATA
TGTAATGGAG ATAAAGAAGT AGGGAAAATG CTTTATAGCT TAGCATTTTT ATTTAGAAGT
CAAGTAAAGG GAAATCTTAT AGTTTCAATA GATCAGGAAA TAAAATACTG TAATAAATAT
TTAGAGCTAT TTAAGTTTAG ATATGATGAG AAATTTAAGT TTAAAATAGA ATGTGAAGAG
GATTTATATG ATAAGGGAAT TGTTAAATTT ACTCTTCAAC CTTTAATTGA AAACTATTTT
GTTCATGGTA TAAGGTTAGA AAGAGATGAT AATGAATTAA AAATATATAT CTATAAACAT
TTAGAAGATA TAGTTGTGGA AGTAATTGAC AATGGTAGAG GAATTACTAA GGAGAAATTA
GATGATATAA ATAGAAGGAT TAGGGAATGC GATCATTCTG GTAAATCAAT AGGGATGCTA
AATGTTCATG AAAGGATTAA AATTAAATAT GGGGAACCTT ACGGGTTAAC TGTTACTAGT
GAGGAGAATA AGGGAACTAA TATGATTTTA AAATTCCCGC TTAGAGAGGT GGAGTAG
 
Protein sequence
MKFSKSNLYK RLFVTYTIVI LSVVSILCIY FLSKTSEEIK RNNLYLNDKI LQDVNETLEY 
NSSTSRRIMN MLYEDDFRLN DVIKYLNSDL VDYIKGKLDY YSASDKLYYN GIESFVKSSF
QLNNFLKSIS FISYSRNEIS VFNRKGEIKT YPFNSNELLD KKDIEYAIYN KNEISIINEI
RDAASLKPEG ILMTTYDIGI ISDVIKKYKD TNSEVLILNK EGMILYDSEN KYDYEYYPYF
DKLKVGRHEI LLEDSYYVDI LPDNNGLMSL VRIKVSNATK VPILFKVSAL LVSLLLFIIA
ECVLYIKFKN LSSRMDSLVL AMEKVEKGDI DVHIPLSKDR DEITFIADNF NKMCEKLNDH
IRKSYLAELR QREAEIVALQ NQINPHFLYN TLESIRMKAI CNGDKEVGKM LYSLAFLFRS
QVKGNLIVSI DQEIKYCNKY LELFKFRYDE KFKFKIECEE DLYDKGIVKF TLQPLIENYF
VHGIRLERDD NELKIYIYKH LEDIVVEVID NGRGITKEKL DDINRRIREC DHSGKSIGML
NVHERIKIKY GEPYGLTVTS EENKGTNMIL KFPLREVE