| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2040 |
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| Symbol | |
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| ID | 4204901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2255210 |
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| End bp | 2257156 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566590 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_699349 |
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| Protein GI | 110801950 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA AAAATAACAA TTATGATGTT ACCTCTTTAA CTTCTTTAGA AAAGTTAGAA
CCAGTAAGAG TAAGACCAGG AATGTACATA GGTTCTACAG GAAGCAAGGG ACTTCATCAT
TGTATATGGG AAATATTAGA TAACTCTATA GACGAAATAT CAAATGGATA TGGAAATAAG
GCTAAGGTTA TTTTAAATAA AGATAAAAGT GTAACTGTAA TAGATAATGG AAGAGGAATT
CCTACGGGAA TGCATCCAAT AAAGAAAAAA ACTGGTGTTG AAATGGTATT TACAGAGCTT
CACACTGGGG GTAAGTTTAA TAACCAAAAC TATAAGACTT CAGGAGGACT TCATGGTGTT
GGAGCAGCCG TTGTTAATGC CTTATCAAGA TGGTTAGAAG TTGAAGTAAA ACAAAATGGA
AAGATATATA GACAAAGATT TGAATATGCT TATGACAAAG AGCTTAAAAA AGATATGCCA
GGAACACCAG TAACTCCATT AGAGGTAGTA GGAGAATCTA AGGAAACTGG AACAAAGGTT
ACTTTTTTAC CAGATAGAGA AGTATTTTCA ACATCAGATT TTAAATTTGA CATAATAGAT
GAAAGATTAC AAGAATTAGC TTTCCAAAAT AAAGGAATAA GATTAGAACT TATTGATAAT
AGAAAAGAAG AAAGTGTAAG TAAAGAATAT TACTCTGAAA GAGGACTTTT AGATTTTATA
GATTATTTAA ATGAAAGTAA AACCCCTCTT CATCCAACTC CTGTTTTATT TGAAGGAGAA
AAAGAAGTAA ATAACATACA AATGTATGGA GAAATATGTC TTCAATTTAC TGATTCAACA
ACAGAAAATA TAGTTAGTTA CGTAAATAAT ATTCCTACTA CAGAGGCTGG TACTCATGAG
ACTGGTTTTA AAACAGGAAT GACTCGTGCT TTTAAGGAAT GGGCTAAAAA GCTTAACCTT
ATAAAAGAAA AAGATAAGGA ATTTGAAGGC GATGATTTAA GAGAAGGTAT GACAGCTATT
GTCAGAATAA AAATCACAAA TCCAGTCTTT GAAGGACAAA CAAAAACTAA GCTTGGGAAT
AATGAAGCTT ACACAATGAT GAATGATTTA GCTTACACTA AATTTGGTCA TTGGATAGAG
GATAATAAAG AAGTTGCAAC TATGATTATA AATAATGCCT TAGAAGCAGC TGCTAGAAGA
GAAAAAATTA AAAAGATTAA TGATGCAGAG AGAAAGAAAA TAGGAAAAGG AACAGCACCT
TTAGCAGGAA AGGTTGCAGT ATGCACATTA AAAAATAAAG AAGCTAATGA ATTCATAGTA
GTTGAGGGAG ATTCTGCAGG TGGATCAGCT AAGCAAGCTA GAGATAGAAG ATTCCAAACA
ATAATGCCTT CAAAAGGTAA AATAATGAAT ACAGAAAAAC AAAAGTTAGA AAATGTTATA
GCTTCTGAGG AATTAAAAAT CTTTAATACT GCCATAGGTA CAGGAATTTT AGACAATTAT
AATGAAGAAG ATTTAAAATA TGACAAAATA ATAATAATGA GTGATGCTGA CGTAGATGGA
TATCATATAA GAACTCTTTG GATGACATAT ATCTATAGAT ACATGAGACC TCTTATAGCT
AATGGTCATC TTTATTTAGC ACAACCACCT CTTTATAAAG TTGCTAAATC AGGTAAGGGT
AAAGATAAGA TTCTTTATGC TTATAGTGAT GACGAATTAG AAGAAGTTAA AAAGAAGGTA
GGAAAGGGAG CAACTATTCA AAGATTTAAA GGACTTGGAG AAATGAATCC AGACCAATTA
TGGGAGACAA CTTTAAATCC AGAAACAAGA ACTTTAGTAC AAGTTACTAT AGAAGATGCC
GCTAAGGCTG AAAAAATGGT TTCTTTATTA ATGGGTGATG TTGTTCAGCC TAGAAAGAAC
TATATGTATA AGTATGCTGA GTTCTAA
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| Protein sequence | MSNKNNNYDV TSLTSLEKLE PVRVRPGMYI GSTGSKGLHH CIWEILDNSI DEISNGYGNK
AKVILNKDKS VTVIDNGRGI PTGMHPIKKK TGVEMVFTEL HTGGKFNNQN YKTSGGLHGV
GAAVVNALSR WLEVEVKQNG KIYRQRFEYA YDKELKKDMP GTPVTPLEVV GESKETGTKV
TFLPDREVFS TSDFKFDIID ERLQELAFQN KGIRLELIDN RKEESVSKEY YSERGLLDFI
DYLNESKTPL HPTPVLFEGE KEVNNIQMYG EICLQFTDST TENIVSYVNN IPTTEAGTHE
TGFKTGMTRA FKEWAKKLNL IKEKDKEFEG DDLREGMTAI VRIKITNPVF EGQTKTKLGN
NEAYTMMNDL AYTKFGHWIE DNKEVATMII NNALEAAARR EKIKKINDAE RKKIGKGTAP
LAGKVAVCTL KNKEANEFIV VEGDSAGGSA KQARDRRFQT IMPSKGKIMN TEKQKLENVI
ASEELKIFNT AIGTGILDNY NEEDLKYDKI IIMSDADVDG YHIRTLWMTY IYRYMRPLIA
NGHLYLAQPP LYKVAKSGKG KDKILYAYSD DELEEVKKKV GKGATIQRFK GLGEMNPDQL
WETTLNPETR TLVQVTIEDA AKAEKMVSLL MGDVVQPRKN YMYKYAEF
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