Gene CPR_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2038 
Symbol 
ID4204331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2251670 
End bp2252245 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content32% 
IMG OID642566588 
ProductDJ-1 family protein 
Protein accessionYP_699347 
Protein GI110801657 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family
[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TATTAGTATT TTTAGCAGAA GGTTTTGAGA CTATAGAAGC ATTGTCTGTT 
GTAGATGTTT GTAATAGGGC TAAGGTAACA TGTCATGCAT GTAGTCTTAC AGAAAATAGA
ACTGTTAATA GTGCTCATGG AACAATGGTG CTTTGTGATA AATTAATATC AGATAATGAT
TTAGAAACTT ATGATGCAAT TGTACTTCCA GGTGGAATGC CAGGATCAAC AAATCTTAGA
GATAATGAGA AAGTACAATC ATTAATAAAG AAATATAATG AAGAAAATAA AATTGTGGCT
GCAATATGTG CTGCTCCAAT AGCTTTAGCT AAGGCTGGCG TTATTGAAGG AAAGAAGGTT
ACAAGTTATC CAGGATTTAA AGAGGAACTT GGAAATGTTA ATTATGTAGA AGAAGACACA
GTAGTTGTGG ATGGAAACAC AATAACTAGT AGAGGACCTG CAACCGCCTT AGTATTTGGA
TTAGAAATAT TAAAAAAGCT AGGATATGAA AAAGAAGCAG AGGAAATAAG AGAAGGAATG
CTTATTAACT TTTTCTTAGA AAAAGAATGT AAGTAG
 
Protein sequence
MKKVLVFLAE GFETIEALSV VDVCNRAKVT CHACSLTENR TVNSAHGTMV LCDKLISDND 
LETYDAIVLP GGMPGSTNLR DNEKVQSLIK KYNEENKIVA AICAAPIALA KAGVIEGKKV
TSYPGFKEEL GNVNYVEEDT VVVDGNTITS RGPATALVFG LEILKKLGYE KEAEEIREGM
LINFFLEKEC K