| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2036 |
|---|
| Symbol | recJ |
|---|
| ID | 4205075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2248456 |
|---|
| End bp | 2250234 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642566586 |
|---|
| Product | single-stranded-DNA-specific exonuclease RecJ |
|---|
| Protein accession | YP_699345 |
|---|
| Protein GI | 110803111 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGAGC AATGGCTACT TAAACAAAGA AAAAGAGATG AAATAGAAAA TTTAAAGGAA
GAATTAAATA TAGATTTATT AACATCTATT CTTTTGGTGA ATAGAAATAT AAAAGATGAA
AAAGATGCAC GTGAATTTTT ATTTGGTGGA ATTGAAAATT TAAATGACCC TTATCTTATG
AAAGATATGG AGAAAGGGGT TAAAAGGGTA AAAGAAGCCA TAGAAAAGGG AGATAAAATA
ACCATATATG GAGATTATGA TTGCGACGGT GTATCAAGCA CTTCAATTCT TTATAAAGGG
TTAAAAAGAT GCAATGCTAA CTTTAATTAT CACATTCCAG ATAGGGAAGA TGAAGGGTAT
GGTATGAATT CTAAGAGAGT TAAAATTTTA AATGAAGAAG GCACTAAGGT AATTTTAACT
TGTGACAATG GAATAGCAGC CTTTGAAGAA ATAGATTTAG CTGAGAAATT AGGCATGGAT
GTAATATTAA CAGATCATCA TGATATTCCT TTAGTTAAAG ATGAAAATGG AGAGATAAAT
AAAGAAATTC CAAAGGCTTA TGCTGTTATA AATCCTAAAC AGGAAGACTG TAATTATCCA
TTTAAATCCC TATGTGGAGC AGGAATTGCC TTTAAATTTA TATGTGCATT ATATAAGGAA
CTAGGGATTC CACAGGAGGA AGCTTTAGAA TTATTAGAGA TTTGTGCCAT TGCTACTGTG
TGTGATGTAG TTGATCTATT AGGCGAAAAT AGAATAATAG TAAAAAATGG TTTAGAAATG
CTTAATAATA CTAAAAATAA GGGGTTAATA GCCTTAAAGA AATATACAGG TCTTGAGGGA
AAGGAAATGG CACAATATCA TTTAGGATTT GTTATAGGCC CTTGTATAAA TGCTACTGGA
AGACTTGAAA CAGCTGATTT ATCTGTTGAA TTGCTTTTAG CTGAAGATGA TGAAAGGGCA
GATGCTTTAG CTAAGGAGCT TTTTGAACTT AATCAAAGAA GGCAGGAATT AACTAAAGAC
AGCGTTGATA TGGTAATAAA GCAAATAGAA GATAATAATA TGGAAAATGA CAATGTTATT
TTAGTTTATA ATCCTTATAT ACATGAAAGT ATTGCTGGAA TTGTAGCAGG GAGAATAAAA
GAAAAATATA ATGTTCCTAC AATAATAATG ACTAAGGGAA AAGATATGCC TAAGGGATCT
GCAAGGTCTA TAGAAGAATA TAATATTTTT GAGGAATTAT CAAAATGTAA AGAGCTAATA
AGCAAATTTG GAGGACATCC AATGGCTGCG GGTTTATCTG TAGAAGAAAA AAACATACCT
TTATTAAGAA ATATGTTATT AGAAAACTGT AAATTAACAG ATTATGATAT AATACCAAAG
GTTAGAATAG ATGTTAAATT ACCTTTAGAA AGTTTAAATT ATGGATTAGT AGATAGTTTA
GATAAGTTAG AACCCTTTGG AAAAGGAAAT TCTAGCCCGC TTTTTGGAGA GAAAGATGTT
AAAGTAAGCA GGGTTTGGAT AATGGGAAAA GAGCAGAATG TAATTAAGTT TAGATGTAAA
TTAAGAAATA GTTACAAAAC CATAGATGCC ATAGCCTTTG GAAATAAGGT TGAGGAATTT
AAAGAAGATT TTGCTAATAA ATATGGAGAA GAGGAATTAT TAAGAGTATT AGATGGTGGA
AACTGCAACT TTAGCATTGA TTTAATTTAT TACCCAAATA TAAATGAATT TAATGGGAAT
AAATCTATTC AAGCTAATGT AAAATACTTT AGATTATAA
|
|---|
| Protein sequence | MREQWLLKQR KRDEIENLKE ELNIDLLTSI LLVNRNIKDE KDAREFLFGG IENLNDPYLM
KDMEKGVKRV KEAIEKGDKI TIYGDYDCDG VSSTSILYKG LKRCNANFNY HIPDREDEGY
GMNSKRVKIL NEEGTKVILT CDNGIAAFEE IDLAEKLGMD VILTDHHDIP LVKDENGEIN
KEIPKAYAVI NPKQEDCNYP FKSLCGAGIA FKFICALYKE LGIPQEEALE LLEICAIATV
CDVVDLLGEN RIIVKNGLEM LNNTKNKGLI ALKKYTGLEG KEMAQYHLGF VIGPCINATG
RLETADLSVE LLLAEDDERA DALAKELFEL NQRRQELTKD SVDMVIKQIE DNNMENDNVI
LVYNPYIHES IAGIVAGRIK EKYNVPTIIM TKGKDMPKGS ARSIEEYNIF EELSKCKELI
SKFGGHPMAA GLSVEEKNIP LLRNMLLENC KLTDYDIIPK VRIDVKLPLE SLNYGLVDSL
DKLEPFGKGN SSPLFGEKDV KVSRVWIMGK EQNVIKFRCK LRNSYKTIDA IAFGNKVEEF
KEDFANKYGE EELLRVLDGG NCNFSIDLIY YPNINEFNGN KSIQANVKYF RL
|
|---|
| |