| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2029 |
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| Symbol | |
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| ID | 4204019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2237164 |
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| End bp | 2238564 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566579 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_699338 |
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| Protein GI | 110801514 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTTG GAAAAAATGA ATTAGGTAGT CAATTTGAAA CACCTATATT TGGAACAGTT
GAAAGTAATG AACCTATTCC AAAATATAAA TTAGCAAAAA AATCAATTGC ACCACAAGTT
GCATATAGAT TAATAAAAGA TGATTTACTA GATGAAGGTA ATGCACGTCA AAACTTAGCA
ACATTTTGTC AAACATATAT GGATGATGAA GCAGTAAAAT TAATGTCAGA GACATTAGAG
AAAAATGCTA TAGATAAATC AGAATATCCA CAAACAACAG ATATGGAAAA CCGTTGTGTA
AATATATTAG CTGATTTATG GCATGCTCCA AAAGAATTAA ATTATATGGG AACTTCAACA
GTTGGATCAT CAGAAGCTTG TATGCTTGGT GGTATGGCTA TGAAATTTAG ATGGAGAAAT
AGAGCAAAAG CTTTAGGTAT GGATGTTACA TCTAAAAAAC CAAACTTAGT AATCTCTTCA
GGATACCAAG TATGTTGGGA AAAATTCTGT GTTTATTGGG ATATAGAAAT GAGATTAGTT
CCAATGGATG AACAACATAT GAGTATAAAT GTAGATAAAG TTTTAGACTA TGTTGATGAT
TATACAATAG GTGTAGTTGG AATACTAGGA ATTACTTACA CTGGTAAATA TGACGATATA
AAAGCTTTAG ATAAAAAATT AGAAGAATAC AATAAAACAG CAAAAATAAC AGTTCCAATA
CATGTTGATG GTGCTTCAGG AGCTATGTTT GCTCCATTTA TAGAACCTGA TTTAAAATGG
GACTTCCAAT TAAAAAATGT TGTTTCAATT AGTACATCAG GTCATAAATA TGGATTAGTT
TATCCAGGTA TAGGTTGGGT ATTATGGAAA GATAAAGAAT ACTTACCTCA AGAATTAGTA
TTTGAAGTAA GCTATTTAGG TGGAAAAATG CCTACAATGG CAATAAACTT CTCAAGATCA
GCTAGCCAAA TTCTTGGTCA ATACTATAAC TTCTTAAGAT ACGGATTTGA AGGTTATAGA
CAAATACATC AAAGAACAAA AGATGTAGCT ATGTACTTAT CAAGTGAACT TGAAAAAACT
GGTTTATTTG AAATATATAA TAATGGTGAA AACTTACCAA TAGTTTGCTA CAAATTAAAA
GATGATGTTA AAGTAAACTG GACATTATAT GATTTAGCAG ATAGATTATT AATGAAAGGA
TGGCAAGTAC CTGCTTATCC ATTACCAGAA GATTTACAAA ATGTAATAAT TCAAAGATTT
GTATGTCGTG CAGATTTAAG TAGAAACTTA GCTGATTTAT TAATGAGAGA TTTAAAAGCA
GCTATAGAAG ATTTAAATAA TGCAAGAATT TTAAGCAAAA CTCAAGTAGA TAATAAGGGA
GTACAAGGAT TTACTCACTA G
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| Protein sequence | MLFGKNELGS QFETPIFGTV ESNEPIPKYK LAKKSIAPQV AYRLIKDDLL DEGNARQNLA
TFCQTYMDDE AVKLMSETLE KNAIDKSEYP QTTDMENRCV NILADLWHAP KELNYMGTST
VGSSEACMLG GMAMKFRWRN RAKALGMDVT SKKPNLVISS GYQVCWEKFC VYWDIEMRLV
PMDEQHMSIN VDKVLDYVDD YTIGVVGILG ITYTGKYDDI KALDKKLEEY NKTAKITVPI
HVDGASGAMF APFIEPDLKW DFQLKNVVSI STSGHKYGLV YPGIGWVLWK DKEYLPQELV
FEVSYLGGKM PTMAINFSRS ASQILGQYYN FLRYGFEGYR QIHQRTKDVA MYLSSELEKT
GLFEIYNNGE NLPIVCYKLK DDVKVNWTLY DLADRLLMKG WQVPAYPLPE DLQNVIIQRF
VCRADLSRNL ADLLMRDLKA AIEDLNNARI LSKTQVDNKG VQGFTH
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