| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2022 |
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| Symbol | spoIIAA |
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| ID | 4206558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2227604 |
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| End bp | 2227939 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566572 |
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| Product | anti-sigma F factor antagonist |
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| Protein accession | YP_699331 |
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| Protein GI | 110801809 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR02886] anti-sigma F factor antagonist |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGTTAG ATTTTGAGAA AATAGGAAAT GTTTTAGTTG TAAGTTTAAT TGGAGAATTA
GATCATCATA GTGCAGAAGA AGTAAGAGTA AAAATTGATG ATAGGATTAG TAGAGAAAAT
ATAAGAAAGC TTGTATTGGA TTTTTCAGGT GTAACTTTTA TGGATAGTTC AGGAATTGGT
GTTATTATTG GAAGGTATAA AAAGATAAGT ATGCGATCAG GTGAAGTTAA CATAATATCT
GTAAGTAAAA GCATAAAAAG AGTTTTTGAA TTATCTGGAA TATTTAAGAT AATAAAGTAT
TACGAAAATT TGGATGAAGC TCTAAAAGTG GGTTAA
|
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| Protein sequence | MWLDFEKIGN VLVVSLIGEL DHHSAEEVRV KIDDRISREN IRKLVLDFSG VTFMDSSGIG
VIIGRYKKIS MRSGEVNIIS VSKSIKRVFE LSGIFKIIKY YENLDEALKV G
|
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