Gene CPR_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2019 
SymbolspoVAC 
ID4205118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2225789 
End bp2226256 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content33% 
IMG OID642566569 
Productstage V sporulation protein AC 
Protein accessionYP_699328 
Protein GI110803095 
COG category 
COG ID 
TIGRFAM ID[TIGR02838] stage V sporulation protein AC 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAAA ATGATAAAAA AATAAGGACT AAGTTTGATC AACTTGAACA ACAAATAAGA 
CCAAAACCAA AGCTTCTTAG AAATTGTATA ATGGCATTTA TAGTAGGTGG ATTAATTTGT
GTAATAGGAC AATTTGTGAG AAATACTTTT TTATACTATG GCTTCACAGA AGAACAAGTT
AGTAGTTTGA CACCTATGAC TATGGTTTTT TTAGGGGCTC TTTTAACAGG ACTTGGATTA
TATGATAAAA TAGCCGCTAA GGCTGGAGCA GGTACTATAG TTCCTATTAC TGGTTTTTCA
AATGCCATGG TGTCACCTGC CATAGAATTT AAAAAAGAAG GATTTGTAAT GGGAGTAGGT
GCTAAAATGT TTACTATTGC AGGTCCTGTT TTAGTTTATG GTACAGGAAC CTCTGTAATA
GTTGGACTAA TATATTACTT ATTACTTAGA TTTGGAATTG TGGGGTGA
 
Protein sequence
MYENDKKIRT KFDQLEQQIR PKPKLLRNCI MAFIVGGLIC VIGQFVRNTF LYYGFTEEQV 
SSLTPMTMVF LGALLTGLGL YDKIAAKAGA GTIVPITGFS NAMVSPAIEF KKEGFVMGVG
AKMFTIAGPV LVYGTGTSVI VGLIYYLLLR FGIVG