Gene CPR_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2000 
Symbol 
ID4204676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2206105 
End bp2206461 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content28% 
IMG OID642566550 
ProductGntR family transcriptional regulator 
Protein accessionYP_699309 
Protein GI110802328 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTG AAGTAAACGA TAGAGAACCA ATTTATCTCC AAATAATAAG ACATATAAAA 
CAATCTTTAG TTATTGGAAA TTTAAAGCCA GGGGATCATA TACCATCAAG GAGGGAGCTT
GCAGAAATGT TAAAAGTAAA TCCTAATACG GTTCAAAGAG CATATAGAGA TATGGAGACT
ATGGGACTTA TAGAAACAAT AAGAAATAAA CCAAGTACTA TAACAGAAGA TGAAGAAATA
TTAAAAAATA TAAGAAAAGA GCTTGTAGAG GATGCATTAG ATGGATTTAT AGAAAGTATG
AAAGCTATAA AGTTAACTAA GGAAGAAGTT TTAGAAATTA TTAAAGAGAG ATATTAA
 
Protein sequence
MFFEVNDREP IYLQIIRHIK QSLVIGNLKP GDHIPSRREL AEMLKVNPNT VQRAYRDMET 
MGLIETIRNK PSTITEDEEI LKNIRKELVE DALDGFIESM KAIKLTKEEV LEIIKERY