| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1976 |
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| Symbol | dnaG |
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| ID | 4205560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2182362 |
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| End bp | 2184149 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566526 |
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| Product | DNA primase |
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| Protein accession | YP_699285 |
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| Protein GI | 110802989 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00122543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGAATTT CAGAAGAAAT TATAGAAAAA GTTAAAGAGC AGAACGATAT TGTTGATGTT
GTTTCTGATG TGGTAAGACT AAAAAGAGCT GGAAGAAATT TTTCTGGTTT ATGTCCATTC
CATAATGAAA AAAGTCCATC TTTTAGTGTT TCTCCTGACA AACAAATATT TAAGTGCTTC
GGATGTGGGG AAGCTGGAAA TGTAATAAGT TTTGTTATGA AAACTAAAAA TTTAAATTTT
GTAGATGCTG TTAAAGAGTT AGCTGATAGG GCTAATATAA TAATACCTAT AGAGGATGGT
AAGCAAAGCG AATCTCAAAA GAAAAAGCAG GTTTTATATA ACATAAATAA GCAAGCTGCT
AGATATTACT TTTCTAATCT TCAAAATAAT AAGGAAGCTA AGGAATATTT TTTAAGAAGG
GGAATAAAAG AAAATATATT AAAAAGCTTT GGTCTTGGAT ACGCTAAGGA AGGGTGGCAA
AACACCATAA ACCATCTTAG AAAACAAGGC TTTAGTAATG AAGCCATTGA GGCAGCTGGA
TTAGGGATTA AGAGTGAAAA GGGAACTTTT TATGATAGAT TCAGAAATAG AGTTATTTTC
CCTGTATTTG ACTACAAAGG AAGTGTAATA GGTTTTGGTG GTAGAGTTTT AGATGATTCT
AAGCCAAAAT ATTTAAACTC TCCAGAAACA TTAGTCTTTC ACAAAGGAAC TAATCTATAT
GCTTTAAATT TTGCTATAAA GCATGGATTA CAGGAAAGAA CATTAATAAT AGTTGAAGGA
TATATGGATT GTATATCACT TCATCAATAT GGAATAACTA ATGTAGTTGC TTCTTTAGGT
ACTGCATTGA CAGACAATCA AGCTAGGTTA TTAAAAAGGT ATGTAGATAG AGTAATAATA
TCCTATGACG CAGATATTGC TGGGCAAATG GCTACTATAC GTGGACTTGA GATATTGCAA
AATGCAGGAT TAGATGTTAG AGTACTAACT GTACCAAAAG GCAAAGATCC AGATGAATTT
ATAAGAGCTA ATGGTAAAGA GTCTTTTATA AAGTTAATTC AATCTGCAAA AAAACTTATA
GATTATAAGC TTCATAGGGC TAGAATTGGT ATAGATTTTT CAGATAATAA TGGATTGATA
AAGTATGCTG AAAGAGTTGT TAATATACTA TCAGATTTAA ATCCTATAGA AAAAGATGTC
TACATAAAGA GGATTTCAGA AGAAACATCC ATAAAAGAAC AAGCATTTTA TGATTTATTA
AATAAAAACT TAATAAATAG TAATAAAAAC CATGAAAATG TGAATGATAA GGAAGAATAT
GGAACAAAAT TATATGTAGA ACCTCCTTAT GTTAAATGTG AAAGAAGTGT TTTAAAACTT
CTTTGTATGG AGGAAAACCA TTCATTAGTA AAGAAATACT TAGAAGATGA TGATTTAATA
TCTCCTAATA TTAAATCCTT AGAAAAGATA ATCAATGATT CAATTGAGGA AATAGGATTT
AATAACTTAG GAAAACATGT AGAAGCTAAG TGTGAGGATC CAAAAGTTTT AAAGGAATGG
TTAGAAGTAA AAGAATTACT TATTCTAGAT CATTCTTCTA ATATAGAAGT TCTTGTTAGA
GATTATATTA ATCTTATTAG AAAATATAAG TTAGAACAGG AACAGACTAC TGTACTTAAA
GAATTAAAAA GATGTGAACA AAACAATATG TTTAAAGAGT CACTTGATTT AGTAAAAAGA
GCTAAAGAAA TAAGTGATAA ATTAAAAGAA CTAGAAAGGA GTAAGTAG
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| Protein sequence | MRISEEIIEK VKEQNDIVDV VSDVVRLKRA GRNFSGLCPF HNEKSPSFSV SPDKQIFKCF
GCGEAGNVIS FVMKTKNLNF VDAVKELADR ANIIIPIEDG KQSESQKKKQ VLYNINKQAA
RYYFSNLQNN KEAKEYFLRR GIKENILKSF GLGYAKEGWQ NTINHLRKQG FSNEAIEAAG
LGIKSEKGTF YDRFRNRVIF PVFDYKGSVI GFGGRVLDDS KPKYLNSPET LVFHKGTNLY
ALNFAIKHGL QERTLIIVEG YMDCISLHQY GITNVVASLG TALTDNQARL LKRYVDRVII
SYDADIAGQM ATIRGLEILQ NAGLDVRVLT VPKGKDPDEF IRANGKESFI KLIQSAKKLI
DYKLHRARIG IDFSDNNGLI KYAERVVNIL SDLNPIEKDV YIKRISEETS IKEQAFYDLL
NKNLINSNKN HENVNDKEEY GTKLYVEPPY VKCERSVLKL LCMEENHSLV KKYLEDDDLI
SPNIKSLEKI INDSIEEIGF NNLGKHVEAK CEDPKVLKEW LEVKELLILD HSSNIEVLVR
DYINLIRKYK LEQEQTTVLK ELKRCEQNNM FKESLDLVKR AKEISDKLKE LERSK
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