| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1944 |
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| Symbol | |
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| ID | 4204481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2147643 |
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| End bp | 2148287 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566494 |
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| Product | pyrophosphatase PpaX |
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| Protein accession | YP_699254 |
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| Protein GI | 110802465 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAG CAGTATTGTT TGACCTAGAT GGAACATTGA TAAATACTAA TGATTTAATA
CTAAAATCAT TTAAACATAC ATTTAAAACT ATATTAGATT TAGAGCCAAG TGAAGAAGAG
ATTACTATGA ACTATGGTAG ACCATTGCAG GAAATTTTTA AATCCTATGA TGAAAATAGA
ATAGAAGAAA TGATTAATTG TTACAGAAAA ATAAATTTAG AATTACATGA TGATGAATGT
AAAGAGTTTG CTGGAGTCGA TTTAATGTTA AAAACATTAA AGAGCAAAGG AATTAAAATT
GGAGTTGTAA CTTCAAAGAA AAATGATATG GCAGAACGTG GAGCTAAATT AATGGGTATA
TTTAAGTATT TTGATACTTT TATAACTTCT GAAATCACTA CAAAGCATAA GCCAGATGGG
GAGCCTGTTT TAAAGGCTTG TGAAAATTTA GGAGTATCTC CTAGTGAAGC TCTTATGGTA
GGTGATTCAC CTTACGATAT TTTAGCAGGT AAAAACGCTG GGGCTAAGAC TTGTGGAGTT
AAATATACAG CATTGCCTCT TGAAAAATTA GAAGAGAGTA AGCCAGACTT TTATGTAGAT
AAACCTTTAG AAATTTTAGA TCTTGTTGAA AAATTAAATT CCTAA
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| Protein sequence | MIKAVLFDLD GTLINTNDLI LKSFKHTFKT ILDLEPSEEE ITMNYGRPLQ EIFKSYDENR
IEEMINCYRK INLELHDDEC KEFAGVDLML KTLKSKGIKI GVVTSKKNDM AERGAKLMGI
FKYFDTFITS EITTKHKPDG EPVLKACENL GVSPSEALMV GDSPYDILAG KNAGAKTCGV
KYTALPLEKL EESKPDFYVD KPLEILDLVE KLNS
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