Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1912 |
Symbol | tgt |
ID | 4206159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2110382 |
End bp | 2111524 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566462 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_699222 |
Protein GI | 110803753 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.288264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA AAAGATATAC TCTTTTAAAA AAAGACGGAA AAGCTAGAAG AGGTGAGTTT GTAACTCCTC ACGGTACAAT TCAAACTCCT GTTTTTATGA ATGTAGGAAC TTTAGCAGCC ATAAAAGGTG CTGTTTCTTC AATGGATTTA AAAGAAATAG GATGTCAAGT AGAACTTTCT AATACATACC ATTTACATTT AAGACCAGGA GATAAGATTG TAAAGCAAAT GGGAGGTTTA CATAACTTTA TGAATTGGGA TAGACCAATC TTAACAGATT CAGGTGGATT CCAAGTTTTC TCATTAGCAG GAATGAGAAA GATAAAAGAA GAGGGAGTTT ATTTTAACTC ACACATAGAT GGTAGAAAAA TATTCATGGG ACCAGAAGAA AGTATGCAAA TACAAAGTAA CTTAGGTTCA ACAATAGCTA TGGCTTTTGA TGAATGTATT CCAAACCCAT CAACTAGAGA ATATGTAGAA AAGTCAGTTG CAAGAACAAC AAGATGGCTT GAAAGATGTA AAAAGGAAAT GGATAGATTA AATTCATTAG ATGACACTGT TAATAAAGAG CAAATGCTTT TTGGTATTAA CCAAGGTGGA GTTTATGAAG ATATAAGAAT AGAACATGCT AAAACTATAA GAGAAATGGA TTTAGATGGA TATGCTATTG GAGGATTAGC AGTTGGAGAA ACTCATGAAG AAATGTATAG AGTTATAGAT GCTGTAGTTC CTCACTTACC AGAGGATAAA CCAATATATT TAATGGGGGT TGGTCTTCCA TCAAATATAT TAGAGGCAGT AGAAAGAGGA GTAGACTTCT TTGATTGTGT TTTACCTGCT AGAAATGGAA GACATGGTCA TGTTTTCACT AAAGAAGGTA AAATAAACTT AATGAATGCT AAGTTTGAAT TAGATGCTAG ACCAATAGAT GAAGGATGTC AATGTCCTGC ATGTAAAAAT TACACAAGAG CATATATAAG ACACTTATTT AAGGCTAAAG AAATGTTAGC TATGAGATTA TGTGTTCTTC ACAATCTATA CTTCTATAAT AAGCTTATGG AGGATATAAG AGATGCTATA GATGGCGGAT ACTTTGCAGA ATTCAAAGCT AAAAAGTTAG AAGAGTGGAA TGGAAGAGCT TAA
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Protein sequence | MTKKRYTLLK KDGKARRGEF VTPHGTIQTP VFMNVGTLAA IKGAVSSMDL KEIGCQVELS NTYHLHLRPG DKIVKQMGGL HNFMNWDRPI LTDSGGFQVF SLAGMRKIKE EGVYFNSHID GRKIFMGPEE SMQIQSNLGS TIAMAFDECI PNPSTREYVE KSVARTTRWL ERCKKEMDRL NSLDDTVNKE QMLFGINQGG VYEDIRIEHA KTIREMDLDG YAIGGLAVGE THEEMYRVID AVVPHLPEDK PIYLMGVGLP SNILEAVERG VDFFDCVLPA RNGRHGHVFT KEGKINLMNA KFELDARPID EGCQCPACKN YTRAYIRHLF KAKEMLAMRL CVLHNLYFYN KLMEDIRDAI DGGYFAEFKA KKLEEWNGRA
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