Gene CPR_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1891 
Symbol 
ID4206214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2088309 
End bp2088980 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content29% 
IMG OID642566441 
ProductDNA-binding response regulator 
Protein accessionYP_699201 
Protein GI110803691 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA CGGTACTTAT TGTAGAAGAT GAAATACGTA TAAGATTTCT TGTAAGAGAT 
TACTTCAAAA AAGAGGGATT TAATGTGTTA GAAGCTTCTG ATGGTGAGGA AGCTCTTAGG
ATATTTTCTG AAAATATAGT TGATTTAGCA ATATTAGATA TAATGATGCC AAAATTAGAT
GGACTTGCTG TTTGTAGAAA TATAAGGGAA GTTTCCAATA CTCCTATAAT ATTATTAACA
GCTAAAAGCC AAGAAGAAGA TAAACTTTTA GGTTATGAGC TTGGAGCTGA TGACTATATG
ACTAAACCTT TTAGTCCTAA GGTTTTATTA GCAAAGTCTA AAGCATTATT AAGAAGAACA
GGTACATTAA ATGATAAAAA CATTTTAGAT TTTAATGGAT TAACAATAAA TAAACTATCT
CATGAAGTAA AACTAAATGG AGAAGAACTA TTACTATCTC CTAAGGAATA TGATTTACTT
ATTTATCTTT CTTCAAATGA AGGAATAGCT TTATCAAGGG ATAGAATTCT AGATAATGTT
TGGGGCTATG ATTATTTTGG AGATATAAGA ACAGTTGATA CGAACATAAA AAGACTTAGA
GAGAAATTAC TAGATAAAGC TAATTATATA GCTACTGTTA GGGGAAGTGG CTATAAGTTT
GAGGTGAAAT AG
 
Protein sequence
MNKTVLIVED EIRIRFLVRD YFKKEGFNVL EASDGEEALR IFSENIVDLA ILDIMMPKLD 
GLAVCRNIRE VSNTPIILLT AKSQEEDKLL GYELGADDYM TKPFSPKVLL AKSKALLRRT
GTLNDKNILD FNGLTINKLS HEVKLNGEEL LLSPKEYDLL IYLSSNEGIA LSRDRILDNV
WGYDYFGDIR TVDTNIKRLR EKLLDKANYI ATVRGSGYKF EVK