Gene CPR_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1890 
Symbol 
ID4204656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2086970 
End bp2088214 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content28% 
IMG OID642566440 
ProductM16 family peptidase 
Protein accessionYP_699200 
Protein GI110802347 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT GGACATTTGA TGAAAATACC ATAATTTTAC CCAATGGGCT AAAAGTTATA 
ACAATAAAAA AAAATACAAG GTTAGCATCT ATAAATATTG GTGTTAATAT AGGATCTTTA
TATGAAGATG AAAAAGAATT AGGCATGAGC CACTTTGTTG AGCACATGCT TTTTAAAGGA
ACAAAAAATA GAAGTAATGA ACAATTAAAT AGAGAATTAG AATTTTTAGG TGGAGATTAT
AATGCATATA CAGATTATAT TTCAACAGTA TATAGCATTA CTTGTCTAGA TGAAGAATTT
GAAAAAGGAA TAGAACTTTT AAGCGATATG ATTTTAAATT CTTCCTTTGA TGAAAAAGAG
ATGAAAAAAG AAAAGGGCGT TGTTTTATCA GAGATAAAAA GTGATAAGGA TGATATTGAA
GATTTAAGTA TTAGCAGAAT CCATGAATAT GCTTTTGATA AATCAGCACT TAGAAATTCT
ATTGCAGGAA CTGAAGAACA TGTTAAGGGA TTTAAAAGAA AGCAGGTTTA TGATTTTTAT
AAAAAATATT ATACTCCTGA TAATTGTGTT ATTGTAACTG TAAGTGCCTT TAGTCATGAA
CAAATGCAAA AAATAATAAC AGACTTATTT GGAAAATGGG AAGGAAAATC TCATAAAAAG
GCTAAAATAA TAAAAGAAGA AAATAAAAAC ATAGTAAAAA CAACTTACAA ATCTCAAATA
GAGCAAGGAA CAGTTACTTA TCTTTATGCC TTTAAAGAAG TTTGTGAAAA AGATAAACTT
CCATTAAAGA TATTAAGTTA TAAACTAGCT GAAAGTTCAA ACTCAATATT ATTTAGAGAG
CTTAGAGAAG AGCGTGGATT AGCTTATGAT GTATATAGTC AAATGGATTT AGACGAAAAT
GTAAATACAA TGAATATTTT TACCTCAGTT AGAGAAGAAT CCATAGATGA GGTAATAGAA
GTAATAGACA AAGCTATATT AGACATAAAA AATAGAGATA TAAACTTTGA TGAAGATATG
CTTTGTATGA TGAAAAAAAC TCATAAGACA GGAGTGGTTT CTACCTTAGA AGATTGCAGC
AGTTTATGCA GTTATGTATT AGTTCAAAGC TTAGCGGGAA AAGATATAAC TGAGTTTATA
AATAGCATGG AAGAATTAGA AACTTTAACT GGGGAAGATA TCTATAGGGT TTGTAATAAA
TATTTGAATA AGCCTACTAT ACACATATTA AAACCAATGG AGTAG
 
Protein sequence
MKRWTFDENT IILPNGLKVI TIKKNTRLAS INIGVNIGSL YEDEKELGMS HFVEHMLFKG 
TKNRSNEQLN RELEFLGGDY NAYTDYISTV YSITCLDEEF EKGIELLSDM ILNSSFDEKE
MKKEKGVVLS EIKSDKDDIE DLSISRIHEY AFDKSALRNS IAGTEEHVKG FKRKQVYDFY
KKYYTPDNCV IVTVSAFSHE QMQKIITDLF GKWEGKSHKK AKIIKEENKN IVKTTYKSQI
EQGTVTYLYA FKEVCEKDKL PLKILSYKLA ESSNSILFRE LREERGLAYD VYSQMDLDEN
VNTMNIFTSV REESIDEVIE VIDKAILDIK NRDINFDEDM LCMMKKTHKT GVVSTLEDCS
SLCSYVLVQS LAGKDITEFI NSMEELETLT GEDIYRVCNK YLNKPTIHIL KPME