| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1886 |
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| Symbol | valS |
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| ID | 4204794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2081299 |
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| End bp | 2083941 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642566436 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_699196 |
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| Protein GI | 110802251 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATA AGAATATTTC TACAACGTAT AATCCTAAAG AGTTTGAAGA AAGACTTTAT
AGCAATTGGC AAGAAAAGAA GTATTTTACT CCTGTAATAG ATAAGAGTAA AAAACCTTAC
ACTATAATAA TGCCACCACC AAATATAACT GGTAAATTAC ACTTAGGTCA TGCACTTGAT
AATACACTTC AAGATATGCT TATAAGATTT AAGAGAATGC AAGGATATTG CACTTTATGG
TTACCAGGAC AAGACCATGC TAGTATAGCA ACTGAGGTTA AAGTTGAAAA TGAACTTTTA
AAAGAAGGTC TTTATAAGAA AGAAATGGGA AGAGAAGCTT TCTTAGAAAA AGTTTGGGAA
TGGACAGATG AATATAGAGA AAGAATAAGA GAGCAGCTTA AGAAAATGGG ATGCTCAGCT
GACTTTACAA GAGAAGCTTT CACAATGGAT GAAAACTTAA GTAAGGCAGT AAGACACGTA
TTCGTTAAAT TATATAAAGA AGGTTTAATA TACCAAGGAA ACAGAATAAC TAACTGGTGT
CCTAAATGTC AAACTGCTTT ATCAGATGCT GAGATAGAGT ATGAAGAAAA AGAAGGAAAC
TTCTGGCACA TTAAATACCC AGTAGTTGGT TCAGATGAAT TCTTAGAAAT AGCTACAACT
AGACCTGAAA CTTTACTTGG AGATAGTGCC GTAGCAGTTA ACCCAAGTGA TGAAAGATAT
GCTCACTTAG TAGGTAAAAT GTTAAAATTA CCTTTAACTG ATAGAGAAAT ACCTGTAATC
GCTGATGACT ATGTTGACGT AGAATTTGGA ACAGGAGCAG TTAAAATAAC TCCAGCTCAC
GATCCTAATG ACTTTGAAGT TGGTAAGAGA CATAACTTAC CACAAATAAG AGTTATGGAT
GATAGCGGTG TAATAAATCA CCTAGGTGGA AAATATAAGG GCTTAGATAG ATATGAGGCT
AGAAAACAAA TGGTTGCTGA CTTAGAAGAG TTAGGATTAT TAGTTAAAAT AAAACCTCAT
ACTCACAATG TTGGTACTCA TGATAGATGT GGTACAGTTG TAGAGCCAAT CATATCAAAA
CAATGGTATG TAAAAATGCA ATCATTAGCA GATCCTGCTA TAGAGGTTGT TAGAAACAAA
GGAACTAAAT TCGTTCCAGA AAGATTTGAA AAGACTTACT TCAACTGGAT GGAAAACATT
CAAGATTGGT GTATTTCAAG ACAATTATGG TGGGGACACA GAATACCAGT ATTCTACTGT
AAAGATTGTG GAGAAATCAT GGTTGAATTA GAAGATCCAA CTAAGTGCTG TAAGTGTGGA
TCAGAGAACA TAGAACAAGA TAAAGACGTT CTAGATACTT GGTTTAGTTC AGCTCTATGG
CCTTTCTCAA CTTTAGGATG GCCAGATAGA ACTGATGATT TAGAGTTCTT CTATCCAACA
TCAACATTAG TTACAGGATA CGATATAATA TTCTTCTGGG TTGCTAGAAT GATATTCTCA
GGTATCCACA ACATGGGAGA AACTCCATTT GATACAGTAT TAATTCACGG TATCATAAGA
GATGCTCAAG GAAGAAAAAT GAGTAAATCT TTAGGAAATG GTGTTGATCC ATTAGAAGTT
ATAGATGAAT ATGGTGCTGA TGCATTAAGA TTCATGTTAG TAACAGGAAA TGCTCCAGGA
AATGATATAA GATATATTCC TGAAAGAGTT GAAGCTGCAA GAAACTTTGC TAATAAGATT
TGGAATGCTT CAAGATTCGT TATGATGAAC TTAGATAGAG AGCTTATGGA TAAATACAAA
GACTGCAAAG AGTATAGCTT AGCAGATAAG TGGATATTAT CAAGAATGAA CTCATTAATC
AAAGAAGTTA CAGAAAACAT GGAAAAATAT GAGTTAGGAA TAGCTCTTCA AAAAGTACAT
GATTTCTTAT GGACAGAGTT CTGTGATTAC TATATAGAAT TAGTTAAACC AGTATTATAT
GGTGATGATG AAAAAGCTAA GGGAGTAGTA TTTAACGTAC TTTACACTGT ATTAAATACA
GGATTAAAAT TATTACACCC AGTAATGCCT TTCATAACTG AGGAAATATA TACTCACTTA
AGCACAGAAA CTGAGTCAAT TACAATAGCT ACTTGGCCAA CATATGATGA AGCTTTAAAT
AACGAGAAAG CTGAGAAAGA CATGACATTC ATAATGGAAG CTATAAGATC ATTAAGAAAC
TTAAGAGCTG AAATGAATGT ACCGCCTTCA AGAAAAGCTA AGGTTATGGC TTATGCTTCA
GAGGATGCTA AAGATGCATT TATAAATGGT GGAGCTTACT TAGAAAAGCT TGCATCTGCA
TCAGAAGTTA CTTTCTTAGA TAATAAGAAT AACTTAGACA ATAACTTAGT ATCAGTAGTT
GTTAAGGGTG GAGAATTATT CTTACCATTA CTTGATTTAG TTGATAGAGA AAAAGAGTTA
GAAAGATTAA ATAAAGAGAA AACTAAACTT GAGGGAGAAA TCTTAAGAGT TGATAAGAAA
CTTTCTAATG AAAGATTTGT AAGCAAAGCA CCAGAGGCTG TTGTTAATGA AGAAAGAGCA
AAAGGTGTTA AATATAAAGA AATGTTAGAG GCTGTTCTAG AAAGAATAGA AGCTTTACAA
TAA
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| Protein sequence | MDNKNISTTY NPKEFEERLY SNWQEKKYFT PVIDKSKKPY TIIMPPPNIT GKLHLGHALD
NTLQDMLIRF KRMQGYCTLW LPGQDHASIA TEVKVENELL KEGLYKKEMG REAFLEKVWE
WTDEYRERIR EQLKKMGCSA DFTREAFTMD ENLSKAVRHV FVKLYKEGLI YQGNRITNWC
PKCQTALSDA EIEYEEKEGN FWHIKYPVVG SDEFLEIATT RPETLLGDSA VAVNPSDERY
AHLVGKMLKL PLTDREIPVI ADDYVDVEFG TGAVKITPAH DPNDFEVGKR HNLPQIRVMD
DSGVINHLGG KYKGLDRYEA RKQMVADLEE LGLLVKIKPH THNVGTHDRC GTVVEPIISK
QWYVKMQSLA DPAIEVVRNK GTKFVPERFE KTYFNWMENI QDWCISRQLW WGHRIPVFYC
KDCGEIMVEL EDPTKCCKCG SENIEQDKDV LDTWFSSALW PFSTLGWPDR TDDLEFFYPT
STLVTGYDII FFWVARMIFS GIHNMGETPF DTVLIHGIIR DAQGRKMSKS LGNGVDPLEV
IDEYGADALR FMLVTGNAPG NDIRYIPERV EAARNFANKI WNASRFVMMN LDRELMDKYK
DCKEYSLADK WILSRMNSLI KEVTENMEKY ELGIALQKVH DFLWTEFCDY YIELVKPVLY
GDDEKAKGVV FNVLYTVLNT GLKLLHPVMP FITEEIYTHL STETESITIA TWPTYDEALN
NEKAEKDMTF IMEAIRSLRN LRAEMNVPPS RKAKVMAYAS EDAKDAFING GAYLEKLASA
SEVTFLDNKN NLDNNLVSVV VKGGELFLPL LDLVDREKEL ERLNKEKTKL EGEILRVDKK
LSNERFVSKA PEAVVNEERA KGVKYKEMLE AVLERIEALQ
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