| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1874 |
|---|
| Symbol | |
|---|
| ID | 4206129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2069154 |
|---|
| End bp | 2070296 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642566424 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_699184 |
|---|
| Protein GI | 110803801 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA ATGTTATTGG GGTAGAAATA TCAGGAATAA GAAAATTCTA TAATGAAGTA
GTAAAATTCC CAGAGGCTAT ATCATTAACT TTGGGACAGC CAGATTTTCC TGTTCCAGAA
AAGGTTAAAG AAGCTATGAT AAGGGCTATT GAAGAAGGAA AGACAACATA TACAGCTAAT
GCTGGTATAG TTGAATTGAG GGAAGAAATA TCAGGATTAC TAAAGAACAC TTTTGATATT
GATTTTAGTA AGGATGAAAT AATTATAACT GTAGGTGGAA GTGAAGGGTT ATATGCAGCT
ATGACAGCCA TTTTAAATCC AGGAGAGAAG GTTTTAGTTC CATCAATTGC ATATCCAGCT
TATGAAAGCA TAAGCAAAAT AATAGGATGT GAAGTTATAA ATTACGATTT AAATGAAGAT
TTTTCAGTTA ACATAGAAAG TTTAAAAGAA GGAATAAAAC AAGGGGGAAA ACTTTTAGTA
CTTTCCTATC CATGTAATCC TACAGGTGCA TTACTTAGTA AAAAAAGTAG AGATGAATTA
GTAGAGATTA TAAAAGAAAA TGATATCTTA GTATTAACTG ATGAAATTTA TTCATCCCTT
TGTTTTGAAG AGGAGTATTA TTCTGTAGCT CAATGCAAGG ATATAAAAGA AAAAATAATA
TATGTAAGTG GATTCTCTAA GATGTTTTCA ATGACAGGTC TTAGAATTGG ATATGTAGCA
TGTTCTAAGG AAATATATGA TCAAATTATA AAGGTTCATC AATACAATTC TTCATGTGCA
ACATCTATTT CTCAATGGGG AGCCTTAGAG GGATTAAAAT CTTGTATGAA TGATGTTGAA
AACATGAAGG AATCTTTTAA AGAAAGAATG AATTTTACTT ATAAAAGATT AAAAAGTATG
GGATTAGAAG TGGAAAAACC TAAAGGAGCT TTTTATATTT ATCCTAATAT AAGTAAGTTT
GGATTAACAT CAGAAGAATT TTGTCATAGA TTACTTAAAG AAGGCAAAGT TGCTTGTGTA
CCAGGAGATG CCTTTGGAAA AGGTGGAGAA GGGTATATTA GAATATCTTA CTGTTATAGC
AAAGATGAAC TTGAAAGAGC TTTAGACAAA TTAGAGGATT TTATAAAATT TTTAAAAAAG
TAA
|
|---|
| Protein sequence | MNKNVIGVEI SGIRKFYNEV VKFPEAISLT LGQPDFPVPE KVKEAMIRAI EEGKTTYTAN
AGIVELREEI SGLLKNTFDI DFSKDEIIIT VGGSEGLYAA MTAILNPGEK VLVPSIAYPA
YESISKIIGC EVINYDLNED FSVNIESLKE GIKQGGKLLV LSYPCNPTGA LLSKKSRDEL
VEIIKENDIL VLTDEIYSSL CFEEEYYSVA QCKDIKEKII YVSGFSKMFS MTGLRIGYVA
CSKEIYDQII KVHQYNSSCA TSISQWGALE GLKSCMNDVE NMKESFKERM NFTYKRLKSM
GLEVEKPKGA FYIYPNISKF GLTSEEFCHR LLKEGKVACV PGDAFGKGGE GYIRISYCYS
KDELERALDK LEDFIKFLKK
|
|---|
| |