| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1872 |
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| Symbol | dapA |
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| ID | 4205617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2067134 |
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| End bp | 2068009 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566422 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_699182 |
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| Protein GI | 110802795 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAG GGTCTTGTGT AGCTTTAATA ACACCATTTA CTGAAGATGG CGTTAATTAT
GAAGAGCTAA GAAAATTATT AGAATGGCAC ATTAAAAATC ATACTGACGC TATTTTAGTT
TGTGGAACTA CAGGAGAAGG TTCTACTATG ACTTTAGAAG AAAAGAAAGA AGTTATAAAA
TTCTCTGTGG AAGTTGTAAA TAAAAGAGTT CCTGTAATAG CTGGAACTGG AACAAATAAT
ACTAAGGCTT CAATAGAATT AAGTAAATAC GCTGAAGAAG TTGGCGCTGA TATGGTATTA
ATAATAACTC CATATTATAA TAAAACTTCT CAAAAGGGAT TATATGCTCA TTTCAGTGCT
ATAAATGATG CAATAAATAT TCCTATTATG CTTTATAATG TTCCATCAAG AACTGGAATG
AATATAACTC CATTAATGCT TGATAAACTT GCAAATTTAA ATAATGTAGT TGCTATAAAA
GAAGCTAGCG GAGATCTTTC ACAAGTAGCT AAAATGGCTG AATTATGTGG TGATAGAATT
GCTATCTATT CAGGTAATGA TGATCAAATA GTTCCAATTT TATCTCTAGG CGGAGCTGGT
GTGGTTTCAG TTTTAGCAAA TATTCTTCCT GAAGAAACTC ACAATATATG TGAAAAATAT
TTCTTAGGAG AAGTTATTGA ATCACGTAAC CTTCAACTTA AATATCTTTC ATTAGCAAAT
TCTTTATTTA TAGAAACAAA TCCAATCCCA GTTAAAACAG CTATGAATTT AATGAATTTT
AACTGTGGAC CATTAAGATT ACCATTATGT GAAATGGAAG ATTCTAACTT AGTAATATTA
GAAGAAAACT TAAAAGCTAA TGGTTTAATA AAATAA
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| Protein sequence | MFKGSCVALI TPFTEDGVNY EELRKLLEWH IKNHTDAILV CGTTGEGSTM TLEEKKEVIK
FSVEVVNKRV PVIAGTGTNN TKASIELSKY AEEVGADMVL IITPYYNKTS QKGLYAHFSA
INDAINIPIM LYNVPSRTGM NITPLMLDKL ANLNNVVAIK EASGDLSQVA KMAELCGDRI
AIYSGNDDQI VPILSLGGAG VVSVLANILP EETHNICEKY FLGEVIESRN LQLKYLSLAN
SLFIETNPIP VKTAMNLMNF NCGPLRLPLC EMEDSNLVIL EENLKANGLI K
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