Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1871 |
Symbol | asd |
ID | 4205379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2066132 |
End bp | 2067109 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642566421 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_699181 |
Protein GI | 110802831 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTACAATG TAGCAATAGT TGGGGCAACA GGAAATGTTG GAAGAAAATT CCTTGAAATC CTAGAAGAAA GAAATTTCCC CGTTAAAGAA TTATATTTAT TCGCATCAAA AAGATCAGCA GGAAAAACTT TAAAATTTAA AGGTGAAGAT GTATTAGTTG AAGAATTATG CGAAGGTAAT ATTGAAAACA AGAAAATAAA TTTTGCATTA TTCTCAGCAG GTGGAAGTGT AAGCTTAGAG TTTGCTCCTA TTTTCGCAAA GCATGGAGCA GTGGTTATAG ATAACAGTAG TGCTTGGAGA ATGGATAAAG AAGTTCCTTT AGTAGTACCG GAAGTAAATC CAGAGGATGT AAAATGGCAT AAAGGTATTA TTGCTAATCC AAACTGTTCT ACAATTCAAG CTATGGTAGC TTTAAAGCCA CTATATGATA AATATGGTAT AAAAAGAATA GTTTACTCAA CTTACCAAGC AGTTTCAGGT GCTGGAATTC AAGGTATATT AGATTTACAA GAAGGAACTA CAAAGAAATT CCCATATCCT ATATTAGGTA ATGTAATTCC TCATATAGAT GTATTCTTAG ATAATGGATA CACAAAAGAA GAAATTAAAA TGATTGAAGA AACAAAGAAA ATACTTCATG ATGATAATTT AAGAATAACT GCTACTACAG TTAGGGTACC AGTTTTAAAT GCTCATAGTG AAAGTATAAA TGTAGAGCTT AATTCTGAAT TTGAACTTGA AAATGTTGTA GATTTATTTA ATAATTCTAA AGGAATAATA GTTCATGATG ATGTAGAAAA CTTAAAATAC CCTACTCCAC TTGAACTTAG CGGAAAAGAC GAGGTCTTTG TTGGAAGAAT AAGACGTGAT TTCAGTTTAG ATAATGGTCT TAACCTTTGG GTTGTGGCTG ATAATATAAG AAAAGGGGCA GCTCTTAATG CAATTCAAAT TGCTGAAATA CTTATAAACG AAAAATAA
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Protein sequence | MYNVAIVGAT GNVGRKFLEI LEERNFPVKE LYLFASKRSA GKTLKFKGED VLVEELCEGN IENKKINFAL FSAGGSVSLE FAPIFAKHGA VVIDNSSAWR MDKEVPLVVP EVNPEDVKWH KGIIANPNCS TIQAMVALKP LYDKYGIKRI VYSTYQAVSG AGIQGILDLQ EGTTKKFPYP ILGNVIPHID VFLDNGYTKE EIKMIEETKK ILHDDNLRIT ATTVRVPVLN AHSESINVEL NSEFELENVV DLFNNSKGII VHDDVENLKY PTPLELSGKD EVFVGRIRRD FSLDNGLNLW VVADNIRKGA ALNAIQIAEI LINEK
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