Gene CPR_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1871 
Symbolasd 
ID4205379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2066132 
End bp2067109 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content31% 
IMG OID642566421 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_699181 
Protein GI110802831 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACAATG TAGCAATAGT TGGGGCAACA GGAAATGTTG GAAGAAAATT CCTTGAAATC 
CTAGAAGAAA GAAATTTCCC CGTTAAAGAA TTATATTTAT TCGCATCAAA AAGATCAGCA
GGAAAAACTT TAAAATTTAA AGGTGAAGAT GTATTAGTTG AAGAATTATG CGAAGGTAAT
ATTGAAAACA AGAAAATAAA TTTTGCATTA TTCTCAGCAG GTGGAAGTGT AAGCTTAGAG
TTTGCTCCTA TTTTCGCAAA GCATGGAGCA GTGGTTATAG ATAACAGTAG TGCTTGGAGA
ATGGATAAAG AAGTTCCTTT AGTAGTACCG GAAGTAAATC CAGAGGATGT AAAATGGCAT
AAAGGTATTA TTGCTAATCC AAACTGTTCT ACAATTCAAG CTATGGTAGC TTTAAAGCCA
CTATATGATA AATATGGTAT AAAAAGAATA GTTTACTCAA CTTACCAAGC AGTTTCAGGT
GCTGGAATTC AAGGTATATT AGATTTACAA GAAGGAACTA CAAAGAAATT CCCATATCCT
ATATTAGGTA ATGTAATTCC TCATATAGAT GTATTCTTAG ATAATGGATA CACAAAAGAA
GAAATTAAAA TGATTGAAGA AACAAAGAAA ATACTTCATG ATGATAATTT AAGAATAACT
GCTACTACAG TTAGGGTACC AGTTTTAAAT GCTCATAGTG AAAGTATAAA TGTAGAGCTT
AATTCTGAAT TTGAACTTGA AAATGTTGTA GATTTATTTA ATAATTCTAA AGGAATAATA
GTTCATGATG ATGTAGAAAA CTTAAAATAC CCTACTCCAC TTGAACTTAG CGGAAAAGAC
GAGGTCTTTG TTGGAAGAAT AAGACGTGAT TTCAGTTTAG ATAATGGTCT TAACCTTTGG
GTTGTGGCTG ATAATATAAG AAAAGGGGCA GCTCTTAATG CAATTCAAAT TGCTGAAATA
CTTATAAACG AAAAATAA
 
Protein sequence
MYNVAIVGAT GNVGRKFLEI LEERNFPVKE LYLFASKRSA GKTLKFKGED VLVEELCEGN 
IENKKINFAL FSAGGSVSLE FAPIFAKHGA VVIDNSSAWR MDKEVPLVVP EVNPEDVKWH
KGIIANPNCS TIQAMVALKP LYDKYGIKRI VYSTYQAVSG AGIQGILDLQ EGTTKKFPYP
ILGNVIPHID VFLDNGYTKE EIKMIEETKK ILHDDNLRIT ATTVRVPVLN AHSESINVEL
NSEFELENVV DLFNNSKGII VHDDVENLKY PTPLELSGKD EVFVGRIRRD FSLDNGLNLW
VVADNIRKGA ALNAIQIAEI LINEK