| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1855 |
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| Symbol | |
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| ID | 4206531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2055990 |
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| End bp | 2057330 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566405 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_699169 |
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| Protein GI | 110801839 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000925763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACATTA AACTGACAAA AAAGATAAAA TTTAGCGCTG TTCAGATACT AGCTTTAGGT
TTTTCTATGG TTATTTTATT AGGTGCTATA ATATTAAGTC TTCCAATATC ATCTAAAAGT
GGTGAATTTA CTCCTTTTTT AGATAGTTTA TTTACTTCAA CTTCAGCTGT ATGTGTTACG
GGACTTATAA CATTAAATAC AGCGGCACAT TGGAACTATT TTGGAAAAAC TCTTATAATA
ATTTTAATAC AAATAGGTGG ATTAGGCTTC ATGTCCTTTA CAACTCTATT TGCTTTAATG
GTTAAGAAAA AAATAACCTT AAGGGAAAGA CTTCTTATAC AAGAAGCTAT GAATACCTTT
GGAATACAAG GATTAGTTAG AATGATTAGG TACATATTAA CATTTACATT TTCAGTAGAA
ATGTTAGGTG CATTATTATT GTCCACTCAA TTTATACCGA AATTTGGATT ATTAAAAGGA
ATATACTATA GTATTTGGCA TTCTATATCA GCTTTTTGTA ATGCAGGGTT TGATTTATTT
GGAGATAATC TAGTTGGATA TGCTAACAAT AAAACCGTAA TATTAACAAT TGCAGCATTA
ATAGTAATTG GTGGTTTAGG ATTTACTGTT TGGTCAGAAT TATATAATTA TAAGGGTTAT
AAGAAATTAT CTTTACATTC TAAAGTTGTA ATAATGATAA CAGCTATCCT TTTAATTGGG
GGAGCTATCC TTATGTTCAT ATTTGAATAT AATAATCCTA ATACTCTTAA ATATATGAGT
TTTGGAGATA AATTAACTAA TGCATTCTTT GCTTCAGCAA CCACAAGGAC TGCTGGATTT
AACTCTGTTT CTACTGCAGA TATGACCTTA GCTGGAAAAT TCTTAACTAT ATTATTAATG
TTTGTAGGTG GATCACCAGG ATCAACAGCA GGGGGAATTA AAACTGCTAC CTTTGGTATA
GTAGTACTTA CTCTAATCTC TATAATAAGA GGAAGAGAAG ATACTGAAGT ATTTAAGAAG
AGAATTTCAA AAGAATTAGT GTATAAGGCT TTTGCTGTTT TATTTATAGG TTTTGGTATA
GTGGTACTTG GAACATTAAT TTTAGCAGTA ACGGAACCTG GGTTTTCATT AGAATATATT
CTATATGAAG TTACATCAGC TTTTGCTACA GTTGGATTAA CTCTTGGATT AACTCCATAT
CTTTCAGCAA TAGGAAAAAT AATAATAATA ATAACTATGT ATTTAGGAAG AGTGGGACCT
ATGACTGTTG TTCTAGCTTT AGCTAATAGA AAGAAACCAA GTGCATACAA ATACCCAGAA
GATAAAATAT TAATAGGATA A
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| Protein sequence | MYIKLTKKIK FSAVQILALG FSMVILLGAI ILSLPISSKS GEFTPFLDSL FTSTSAVCVT
GLITLNTAAH WNYFGKTLII ILIQIGGLGF MSFTTLFALM VKKKITLRER LLIQEAMNTF
GIQGLVRMIR YILTFTFSVE MLGALLLSTQ FIPKFGLLKG IYYSIWHSIS AFCNAGFDLF
GDNLVGYANN KTVILTIAAL IVIGGLGFTV WSELYNYKGY KKLSLHSKVV IMITAILLIG
GAILMFIFEY NNPNTLKYMS FGDKLTNAFF ASATTRTAGF NSVSTADMTL AGKFLTILLM
FVGGSPGSTA GGIKTATFGI VVLTLISIIR GREDTEVFKK RISKELVYKA FAVLFIGFGI
VVLGTLILAV TEPGFSLEYI LYEVTSAFAT VGLTLGLTPY LSAIGKIIII ITMYLGRVGP
MTVVLALANR KKPSAYKYPE DKILIG
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