Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1831 |
Symbol | |
ID | 4206596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2021314 |
End bp | 2023533 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566381 |
Product | stage V sporulation protein D |
Protein accession | YP_699146 |
Protein GI | 110801826 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR02214] stage V sporulation protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAATA AGAAAAACAA AGGATTTAAA GATTATAAAA TAACAAAGTC ACTTAGATTT AAAAGAACAT ATTGGACCAT GATAGTAGTA TGGGGATTAC TAGGAGTATT AACCTTAAGA TTATCATACA TAATGATTTT TAAGCATAAA GAATATGGTT CAATGGCAGA AGAACAATGG AAACATGAAA TAAAAATAGG AGCTAAAAGA GGAGAAATAC TAGATAGAAA TGGAGCTCAA TTAGCTGTTA GTGCTAATGT TTATAGGGTA GATTTAGATC TCAAAACGCT AAGAGAAGAT ACATTTACTA AAGATGATAC AGATGATACA AAAAAAGAAA AACTTAATAA AATTGCAGGG GAGTTAGGTA CTGCTTTAGG CATGCCTAAA GAAGAGGTAT ATGATAAGAT AAATAGTACT TTTCCATCAG GATTGCCAGC GACATCTGTT ACTTTAATCA GAAAGATAGA AAAAGATAAA GCTGATAGTG TCAAGAATTT AAAGATAAGA GGAGTAATAG TTTCACAAGA TACAAAGAGA TATTACCCAG ATAATAATTT CTTAGCACAA GTATTAGGAA GAGTTGATGC AGATGGTATA GGTCAAGGTG GTATAGAGCG TGAATATAAT GTGGAGTTAT CAGGTTTACC AGGAATGAGA ATATCAGAAG TTGCAAGAAA TAGTAGTGGG ATACCTTATT CAAATTCTGA GTTTGCAAAA CCTGTTGATG GTAAAGATGT CACACTAACC GTTGATGAAA CTATACAGTA TTTTGCAGAA AAAGTTGCAG AAGAAGGAAA AAAAGAATAT AAAGCAGATG GGGTTAGTAT AATAGTTATG AATCCTAAAA ATGGAGAAAT ATTAGCTATG GCTAATAAAC CAGATTATAA TCCTAATGAA CCTTATAAAG GGTATGAAAA TTTCCCTGGT AAAGATAAAA CTGAAAAGAT GGAAAATATG TGGAAAAATG ATGCCGTATC AAATTCATTT GAGCCAGGAT CTATATTTAA AGTGGTAACA TCTTCAGCTG CCGTACAAGA GGGGATAGCA GGTGGAAATG AAACATATTT TTGTCCAGGT GGAAAAAATG TATCTGGAAC TTATATAAAA TGTTGGAAGC CAGATGGGCA TGGAACTGAA ACTTTTGATC AAATATTAGA AAACTCTTGT AACGTTGGGT TTATGGACAT AGGTCAAAAA CTTGGAAAAG AAAAATTAAA TGAATATATA GAAAAGTTTG GATTTGGTAA GCAGACAGGA ATAGATTTAC CTGGAGAAAC AACAGGTATA GTATTGCCAA ATGATAAAAT AGGTCCAGTA GAACTTGCAA CCATATCATT TGGTCAAACA GATAGTGCTA GTTCAGTTCA AATGATGGCA GCTATGAACA CAATTGCTAA TGGAGGAACA TGGATACAAC CTCATATAAT GAAGGAAATA AGCCATGAAG ATCCAAGTGG AGCAAGAGTA GTTGATAAAA CTTTTGTACC TAAAAAAATT AATAATATAA TAGATAAAAA AACTGCTATG AGAGTTTCAG AAGCTTTAGA AAAAACTGTT CATTTTGGAT CTCCAAAGAG AGCTTATATA GAAGGATATG GGATTGCTGG TAAAACTGGT ACAGCTGAAA AGGTTAAAGC TAGTGGAGGA TATGGTGCAG GGTATGTAGC GTCATTTGCT GGATTTGCTC CATATAATGA TCCACAAGTT TCAATTTTAA TATCTGTAGA TAATCCAAAG GGGGAGTACT TTGGAGGATT AGTAGCAGCA CCATTAGCTC ATGATTTATT TAGCGATATA TTTAATTATA TTGAATTAGA TAGTTCAGAT TTAGATAAAA ATAAAGTAAA AGAAGAGATT GTACCAGATG TTAGAGGTAT GAATTTAGAT AAAGCTAAAT CTATTTTAGA TAAAGACAAT ATTAAATATT CTGTAGAAGA TGCTGGAAAT TCTGTAGTTG ATATGAATCC TAAGCCAGGA TATACAATTA AAGAGGGAGA TGAAATTAAA CTTTACACTA AAACTACTTC AAATTATAAT AAAGATGTTG TAGTACCAGA TTTTAATGGA CTTTCAATGG AAAAAGCAAA GGAAATTTTA AACAAAATTG GCTTAAAGGG TACTTTTGCA GGAGAGGGAG TTATTAAGGA ACAAAGTGTA GCTCAAGGTG ATGTAGTTAA AAGTGGTACA TCAATAGAAT TTAAATTAGA TAAAAAATAA
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Protein sequence | MKNKKNKGFK DYKITKSLRF KRTYWTMIVV WGLLGVLTLR LSYIMIFKHK EYGSMAEEQW KHEIKIGAKR GEILDRNGAQ LAVSANVYRV DLDLKTLRED TFTKDDTDDT KKEKLNKIAG ELGTALGMPK EEVYDKINST FPSGLPATSV TLIRKIEKDK ADSVKNLKIR GVIVSQDTKR YYPDNNFLAQ VLGRVDADGI GQGGIEREYN VELSGLPGMR ISEVARNSSG IPYSNSEFAK PVDGKDVTLT VDETIQYFAE KVAEEGKKEY KADGVSIIVM NPKNGEILAM ANKPDYNPNE PYKGYENFPG KDKTEKMENM WKNDAVSNSF EPGSIFKVVT SSAAVQEGIA GGNETYFCPG GKNVSGTYIK CWKPDGHGTE TFDQILENSC NVGFMDIGQK LGKEKLNEYI EKFGFGKQTG IDLPGETTGI VLPNDKIGPV ELATISFGQT DSASSVQMMA AMNTIANGGT WIQPHIMKEI SHEDPSGARV VDKTFVPKKI NNIIDKKTAM RVSEALEKTV HFGSPKRAYI EGYGIAGKTG TAEKVKASGG YGAGYVASFA GFAPYNDPQV SILISVDNPK GEYFGGLVAA PLAHDLFSDI FNYIELDSSD LDKNKVKEEI VPDVRGMNLD KAKSILDKDN IKYSVEDAGN SVVDMNPKPG YTIKEGDEIK LYTKTTSNYN KDVVVPDFNG LSMEKAKEIL NKIGLKGTFA GEGVIKEQSV AQGDVVKSGT SIEFKLDKK
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