| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1823 |
|---|
| Symbol | |
|---|
| ID | 4205288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2013491 |
|---|
| End bp | 2014222 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642566373 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_699138 |
|---|
| Protein GI | 110802101 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3879] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00133406 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAATA GAGAATTTAC TATTTTTATA TTTACGGCTT CAGTTATAGT TGGACTTTTA
ATATCTATGA ACATAAGTTT TGATGGAATA GAAACTACAA AGGTGTTAAA TGCTAAGGAA
TATCAAGATG CATATAATAA ACGCAATAAT CTTTATAATG AAATATCAAA GCTAAATGAA
AGTAATAGAG AATTACAAAA GAAGATAAAT AATTATTCAA AAAATGATGA GGATAGCAAT
AAAATTTCAA AGGATATGAT AGAAGAGTTA AATAATAATT TAATGCTTTC TGGATTAGAA
GAGGCTAAAG GACCAGGTTT AAAAATAGTT TTAGAAGATG GTGGAGAAGC TTTTAGTGGA
GAAGTTGTTG ATGATTTTAT GAGACTTTTA AGAACCATTC ATGATGATGA TATGATAAAA
GTTATAAATG AACTTAAAGC TGCAGGTGCA GAGGCAATAT CTATAAATAA TCAAAGAATA
ATATATAACA CAGAGATATA TTGTGGAGGT CAATTTTTAC GAATGAATGG AGTTAAAATC
CCAGCTCCTT TTTATGTTAA TGTTATAGGT GATCCTGAAA AAATGGAGAA TCAAATTATG
AGAGATGGAA GTTATATTAA AACTCTTATA AATAGAGGAA TAAAGGTTAA AATAACTAAG
AGTGAAGATA TAACTATACC AGCATATATA AGTGATGTGA ATTCTAAGTA TATGGAACCT
AATACAAAAT AA
|
|---|
| Protein sequence | MKNREFTIFI FTASVIVGLL ISMNISFDGI ETTKVLNAKE YQDAYNKRNN LYNEISKLNE
SNRELQKKIN NYSKNDEDSN KISKDMIEEL NNNLMLSGLE EAKGPGLKIV LEDGGEAFSG
EVVDDFMRLL RTIHDDDMIK VINELKAAGA EAISINNQRI IYNTEIYCGG QFLRMNGVKI
PAPFYVNVIG DPEKMENQIM RDGSYIKTLI NRGIKVKITK SEDITIPAYI SDVNSKYMEP
NTK
|
|---|
| |