| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1788 |
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| Symbol | ispA |
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| ID | 4205498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1987934 |
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| End bp | 1988806 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566338 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_699103 |
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| Protein GI | 110802213 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.188169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTA ATAGCTTAAA AGAGGAAGTT GATCAATCTT TAAAAGCTTA TTTTGATAAA
GATAGAGAAT ACAATAAAGT TTTATATGAC TCAATGGCAT ATAGCGTAAA CGTAGGAGGA
AAAAGAATAA GACCAATCTT AATGCTTTTA TCTTACTATA TTTATAAAAG TGATTATAAA
AAAATATTAA CACCTGCAAT AGCTATAGAA ATGATACACA CTTATTCTTT AATACATGAC
GATTTACCAT GTATGGACAA TGATGATTTA AGAAGAGGAA AACCTACAAA TCATAAGGTT
TTTGGAGAAG CTATTGCTGT TTTAGCTGGA GATGCTCTTT TAAATGAAGC TATGAAAATT
TTAGTTGATT ATTCTTTAGA AGAAGGAATA AGTGCATTAA AGGCAACTAA AATAATTGCA
GATGCAGCAG GATCAGATGG AATGATTGGT GGTCAAATTG TTGATATAAT AAATGAAGAT
AAGGAAGAAA TCTCTTTAAA AGAATTAGAT TATATGCATT TAAAGAAAAC TGGAGAACTT
ATAAAAGCTT CAATAATGTC TGGGGCTATT TTAGCGGAAG CTTCAGAGAG AGATATTAAA
AAATTGGAGG ATTTTGGATA TAAGTTAGGC TTAGCATTTC AAATAAAAGA TGATATATTA
GATGTAGTGG GAAATGCAAA AGATTTAGGG AAGAATGTTC ACAAAGACCA AGAAAGCAAT
AAAAATAATT ATATAACCAT TTTTGGATTA GAAGAGTGTA AGAAAAAATG CGTGAATATA
ACTGAGGAAT GTATAGATAT ATTAAGTTCA ATAGAAGGAA ATATAGAGCC TTTAAAAGTT
TTAACCATGA AACTTTTAGA GAGAAAATTT TAA
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| Protein sequence | MNINSLKEEV DQSLKAYFDK DREYNKVLYD SMAYSVNVGG KRIRPILMLL SYYIYKSDYK
KILTPAIAIE MIHTYSLIHD DLPCMDNDDL RRGKPTNHKV FGEAIAVLAG DALLNEAMKI
LVDYSLEEGI SALKATKIIA DAAGSDGMIG GQIVDIINED KEEISLKELD YMHLKKTGEL
IKASIMSGAI LAEASERDIK KLEDFGYKLG LAFQIKDDIL DVVGNAKDLG KNVHKDQESN
KNNYITIFGL EECKKKCVNI TEECIDILSS IEGNIEPLKV LTMKLLERKF
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