Gene CPR_1740 details

Gene Information

• Locus tag: CPR_1740
• Symbol: udk
• ID: 4204462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1937951
• End bp: 1938577
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642566290
• Product: uridine kinase
• Protein accession: YP_699055
• Protein GI: 110801536
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0572] Uridine kinase
• TIGRFAM ID: [TIGR00235] uridine kinase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.627897
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAGAC CAATTTTTAT AGGAATAACA GGAGGCACTG GCTCAGGTAA AAGTACAATA 
GCTAAGGAGA TATATAGACA ATTTGGTGAA GAATGTATAG CAATGATAGA GCAAGATTCA 
TATTATAAGG ATCAAAGTCA TTTATCAATG GATGATAGAG TAAAAACTAA CTATGATCAT 
CCAAATGCTT TTGATAACAA TCTTTTAGTT TCACATTTAG AATCACTTTT AAATGGACAT 
TGTATACAAA AACCTAGTTA TGACTTCTCT ATACATAATA GAATTGAAGA TACAACTAAG 
GTTGAGCCAA AAGAAATTGT TATTGTAGAA GGAATATTAA TACTAGAAGA TCCAAGAATA 
AGAGAGCTTC TAGATATAAA GATTTACGTT GATACAGATG CTGATGTTAG AATCATAAGA 
AGAATGGTCA GAGACATAAA TGAAAGAGGA AGAACTATAG AGTCTGTTAT AAATCAGTAC 
TTAAATGTAG TAAAGCCTAT GCATAATCAA TTTACAGAAC CTACAAAAAA ATTTGCTGAT 
ATAATAATAC CAGAAGGTGG ACATAATAAA GTTGCTATAG ATATTATTGT TGCAAAAATA 
AAAGAGGTTT TAGGAAAATA CGAATAA 

 

Protein sequence

MKRPIFIGIT GGTGSGKSTI AKEIYRQFGE ECIAMIEQDS YYKDQSHLSM DDRVKTNYDH 
PNAFDNNLLV SHLESLLNGH CIQKPSYDFS IHNRIEDTTK VEPKEIVIVE GILILEDPRI 
RELLDIKIYV DTDADVRIIR RMVRDINERG RTIESVINQY LNVVKPMHNQ FTEPTKKFAD 
IIIPEGGHNK VAIDIIVAKI KEVLGKYE