| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1737 |
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| Symbol | pilT |
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| ID | 4204134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1934175 |
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| End bp | 1935227 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566287 |
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| Product | twitching motility protein PilT |
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| Protein accession | YP_699052 |
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| Protein GI | 110801559 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00977471 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGTT TAGCAGAACT TTTAGAGTTA ACAGTTAAAG AAGGAGCATC TGATTTGCAT
TTAACAGTAG GTATTTCTCC TATAATAAAA GTTAATGGAA AATTAGTAAG GTTAGAACAT
GAAATATTGC GCCCTGAAGA TACTGAAGCG TATGCTAAAG AGATATTACA GGATGCATAT
GAAAAGTATG ATGCTATTGG AGAATACGAT ACATCATATT CAATACATGG TAAAGGTAGA
TTTAGAGTTA ATATATATAA ACAAAGAAAT AGTACAGCTT TAGCTATAAG AGTTATATCT
TTAGATATGC CAACTTTAGA TAGTTTAGGA TATCCTGAGA CTTTAAAGGA TATATGTAAT
CTTAAAAGAG GACTTGTATT AGTTACAGGA CCTACTGGAA GTGGTAAAAG TACAACTTTA
GCAGCTTTAA TCAATGAAAT AAATAGTAAT AGAGAATCTC ATATAATAAC AATAGAAGAT
CCTATAGAGT TTCTTCATAA ACATAATAAA TCTATTGTAA ACCAAAGAGA GATAGGAAAG
GATACTTTAA GTTATGAAAG AGCCTTAAAA GCAGCTCTTA GAGAGGATCC TGATGTTATT
TTGATTGGGG AAATGAGAGA TTTGGAGACT ATTTCAACAG CTATAACAGC GGCAGAGACT
GGACACTTAG TATTTTCAAC TCTTCATACT ATAGGAGCTG CTAAGACTAT AGATAGAATA
GTGGATGTTT TTCCACCACA TCAACAAGAG CAAATAAAAA TACAGTTAGC TTCTGTTTTA
CAAACAATTA TATCACAACA ATTAGTGGAA ACCATTGATG GAGAGAGAAC TGCGTCATTA
GAAATAATGG TTGCTACACC AGCTATAAAA AACTTAATAA GAGAAGGAAA AACTCATCAA
ATAGAATCTT CTATCCAAAC TGGAAGTAAA TATGGAATGA GAACTATGGA CATGGAACTT
GCTAATCTAT ATAGAGAAGG TATAATAACA CAAGAAACGG CAATGAATTC TGCTATAGAT
AGGGAAATTT TAAGTCGATT ATTGATGTAT TAA
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| Protein sequence | MQSLAELLEL TVKEGASDLH LTVGISPIIK VNGKLVRLEH EILRPEDTEA YAKEILQDAY
EKYDAIGEYD TSYSIHGKGR FRVNIYKQRN STALAIRVIS LDMPTLDSLG YPETLKDICN
LKRGLVLVTG PTGSGKSTTL AALINEINSN RESHIITIED PIEFLHKHNK SIVNQREIGK
DTLSYERALK AALREDPDVI LIGEMRDLET ISTAITAAET GHLVFSTLHT IGAAKTIDRI
VDVFPPHQQE QIKIQLASVL QTIISQQLVE TIDGERTASL EIMVATPAIK NLIREGKTHQ
IESSIQTGSK YGMRTMDMEL ANLYREGIIT QETAMNSAID REILSRLLMY
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