| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1733 |
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| Symbol | sigE |
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| ID | 4206528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1929769 |
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| End bp | 1930476 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566283 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_699048 |
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| Protein GI | 110801836 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0265453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAATA TAAGACTTTT GCTTAATAAG TTATTTACTA AATTAGATAT TATGGTAGAA
CCAATCTATT ATGTTGGGGG AAATGATGTT CTTCCAGCAC CTCTTAGTAA AGAAGAGGAA
GAGGAGTTAG TTAACAAATT AGGGGAGAAT GATGAAGCTA TTAGAAGTAT TCTTATTGAG
AGAAATTTAA GACTAGTTGT ATATATAGCT AGAAAATTTG AGAACACTGG TGTAGGAGTT
GAGGATTTAA TTTCTGTAGG AACAATTGGA CTTATAAAGG CAGTAAATAC ATTTAATCCA
GAAAAAAAGA TAAAGCTTGC AACCTATGCA TCAAGATGTA TAGAAAATGA AATTCTTATG
TATTTAAGAA GAAATAGCAA GGTTAAAGCT GAGATATCAT TTTATGAGCC CTTAAATATA
GATTGGGATG GAAATGAACT TTTACTTTCA GATATACTTG GTACAGATGA TGATATTGTT
TACAATCTAA TAGAAGATGA AGTTGATAAG GAATTGTTAT TTACTGCAAT GAAGAATCTT
TCAAACAGAG AAAAAGAAAT TGTTGAATTA AGATTTGGAC TATGTGGATA TAAAGAAAAA
ACTCAAAAGG AAGTAGCTGA TATGCTAGGA ATATCTCAAT CTTATATTTC AAGGTTAGAG
AAGAAAATTA TAAAAAGATT AAAGAAAGAA ATTAACAAAA TGATTTAA
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| Protein sequence | MLNIRLLLNK LFTKLDIMVE PIYYVGGNDV LPAPLSKEEE EELVNKLGEN DEAIRSILIE
RNLRLVVYIA RKFENTGVGV EDLISVGTIG LIKAVNTFNP EKKIKLATYA SRCIENEILM
YLRRNSKVKA EISFYEPLNI DWDGNELLLS DILGTDDDIV YNLIEDEVDK ELLFTAMKNL
SNREKEIVEL RFGLCGYKEK TQKEVADMLG ISQSYISRLE KKIIKRLKKE INKMI
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