Gene CPR_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1730 
SymbolnrdR 
ID4205333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1927997 
End bp1928446 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content28% 
IMG OID642566280 
Producttranscriptional regulator NrdR 
Protein accessionYP_699045 
Protein GI110802843 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0593738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATGTC CTTACTGTTC TTATGAAGAA AGTAAAGTTG TGGATTCTAG ATCTGCAGAA 
GATTATAATG CAATTAGAAG AAGAAGAGAA TGTTTAAGAT GTTCTAAAAG ATACACAACT 
TACGAAAAGG TAGAAGATAT ACCAATACTT GTTATAAAAA AGGATTTAAG TAGAGAAAGT 
TTCAATAAAG AAAAAATCAT AAGCGGATTA ATTAAAGCGT GTCAAAAGAG ACCTGTATCT 
AGGGCTCAGA TAGAAGAAAT AGCATCTGAT ATTGAACGAA ACATAAGTAA TAAAATGATG 
GTAGAAATAA AGTCTGATTA CATAGGTGAA ATGATAATGG AGAGACTTAA GGATATAGAC 
GAAGTTTCAT ACGTAAGATT TGCTTCTGTA TATAGACAAT TTAAAGATAT TAATACCTTT 
ATGGAAGAAA TAAAAAATTT AATGAAATAA
 
Protein sequence
MRCPYCSYEE SKVVDSRSAE DYNAIRRRRE CLRCSKRYTT YEKVEDIPIL VIKKDLSRES 
FNKEKIISGL IKACQKRPVS RAQIEEIASD IERNISNKMM VEIKSDYIGE MIMERLKDID 
EVSYVRFASV YRQFKDINTF MEEIKNLMK