| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1728 |
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| Symbol | |
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| ID | 4204037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1925398 |
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| End bp | 1927113 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566278 |
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| Product | sensory box histidine kinase |
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| Protein accession | YP_699043 |
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| Protein GI | 110801444 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00635742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GGATTATTAT TTTCACAACA CTAATAATAA CATTTTTTCT AGCTATAATG
ACTTCTATGT ACTTAGTAAT ATCAAATAAT AAATATTTAG AGGAATCAAA GAATATCCTA
AATGAATATA ATAAGGTCAT AGCTTTATTG TTAGAAAATG ATAATGGAAA TATAAAGAGT
GAATTAGAAA GAATAGAATC AAATAATGAT ATGAAAAATA TAAGAATAAC ATATATCAGT
AAGGATGGAA ATCTTATTTT TGATACTCAT AAAAAATTAA TAAGTGATAA TGAAAGTTAT
CTTAAGAGAC AAGAAATAAT AGAAGCCATA GAAAGTGGTT TAGGAAGCAG TGTAAGATAT
AGTAATGATC TCCATCAAAA CATGATCTAT AGTGCACTAA AACTTAAGGA TGGCTCTATT
GTTAGAACAT CAATAGCTGT TGAAAATGCA AAAATATTAG ATAGCATAAA TAGTAACTAT
TTATTAGTAG GTGTTATATT TTCCTTAGTA ATTGCCTTAC TTTTAACTGT TAAAATAACT
AATATAATAT TAAATCCACT AAAGGAGTTA GAACAATTAA CCTCTACTAT TGCAAGTGGT
AATTTTCATA AAAGAGTAAA AATTAATTCT AAGGATGATG AAATTCAAAG ACTAGGAAAA
AGCTTTAATT ATATGGCAGA GCAATTAGAA ATAACCATGG AGAGGTTTAA GAATAAACAA
AATGGATTAG AAGCCATATT AAAAAGTATG GGTAGTGGAG TAATAGCTTT TGACAGGGAT
ATGAATGTTT TAATGATAAA TCCTTATGCT AAAAAAATAT TTGGCATAAG CGGAGAGATT
ATTGGAAATA AACTTTTGGA TTATATAACT GATAAAGAGG TATTAAAGGC CTTTTTTGAT
GAAAAAGATA GGGTTGAAAT TGAAGTTAAC TATAATGATG ATCCGAAAAT ATTAAAAATA
AGAAAAGCAA GTATAATAAA TGAACCAGAA ATAATAGGGA CAGTTGTGGT TATACAAGAT
ATTACAGATA TTAAAAAACT TGAAAATATG AGAAGTCAAT TTGTAGCTGA TATATCTCAT
GAACTTAAGA CACCACTTAC CTCAATTAAA GGTTTTGCAG AAACCTTAAG ATATGTAGAT
GATGATGAAA CTAGAAATAA ATTTTTAAGC ATAATAGATG AAGAATCAGA TAGATTAGCA
AGACTTTTAG AGGATATATT ATGTCTTTAT GAAATAGAAC AAAAAAGAAG TACTGTTTTA
GAAGAATTTA ATGTTGATGA AGAAATTGAA AAAGTTTATA TGCTATTAAA TGATCAAGCT
AAGAAAAAGG GTGTGGAAAT ATTTTTAGAT ACGCATAGCA ATTGTGTTCT TATGGGAGAT
AAGGATAAGT TTAAACAAAT GTTACTTAAT CTTGTAAGCA ATTCTGTTAA ATATACTGAA
AAAGGTGGAA AGGTAAGAGT TGAAAGTTAT AATCGTGACA TGAATCTTAT TTTAGTTATT
GAAGATAATG GTATTGGAAT AAGTGCAGAG GATCTTCCAA GGATATTTGA AAGATTTTAT
AGAGTAGATA AAGCTAGAAG TAGAGAAAGT GGTGGAACTG GACTAGGTCT TGCCATAGTT
AAACATATAG TTAGACTTTT TGATGGTGAG ATAAATGTAA CTAGTGAACT AGGAGTAGGG
ACTAAAATAG TAATAACTAT ACCTATAAAC ATATAA
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| Protein sequence | MKKRIIIFTT LIITFFLAIM TSMYLVISNN KYLEESKNIL NEYNKVIALL LENDNGNIKS
ELERIESNND MKNIRITYIS KDGNLIFDTH KKLISDNESY LKRQEIIEAI ESGLGSSVRY
SNDLHQNMIY SALKLKDGSI VRTSIAVENA KILDSINSNY LLVGVIFSLV IALLLTVKIT
NIILNPLKEL EQLTSTIASG NFHKRVKINS KDDEIQRLGK SFNYMAEQLE ITMERFKNKQ
NGLEAILKSM GSGVIAFDRD MNVLMINPYA KKIFGISGEI IGNKLLDYIT DKEVLKAFFD
EKDRVEIEVN YNDDPKILKI RKASIINEPE IIGTVVVIQD ITDIKKLENM RSQFVADISH
ELKTPLTSIK GFAETLRYVD DDETRNKFLS IIDEESDRLA RLLEDILCLY EIEQKRSTVL
EEFNVDEEIE KVYMLLNDQA KKKGVEIFLD THSNCVLMGD KDKFKQMLLN LVSNSVKYTE
KGGKVRVESY NRDMNLILVI EDNGIGISAE DLPRIFERFY RVDKARSRES GGTGLGLAIV
KHIVRLFDGE INVTSELGVG TKIVITIPIN I
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