Gene CPR_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1686 
Symbol 
ID4204048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1880512 
End bp1880850 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content26% 
IMG OID642566236 
Productputative DNA-binding protein 
Protein accessionYP_699001 
Protein GI110801455 
COG category[S] Function unknown 
COG ID[COG2739] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000027159 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA GATTTGAAAT ATCAATGTTA ATAGATTACT ATGGAACATT GCTTACGGAA 
AAGCAGTTTA ATGTTATGAC CCTTTATTAC AATGAAGATT TGTCACTAGC AGAGATTGCT
GAAATTAATA AAACCAGTAG GCAAGCAATT TATGATTTAA TCAAAAGATG CTCTAAGCAA
CTTCATTCTT ATGATGAAAA ACTTAAATTA TCAAAAAAAG TTGATAAAAG GTATAGAATT
AAAGAAGAGC TTATGGCAGA ATTAAATAAG AACTCTAATT TAGATGAAGA TATAAAAAAA
TATATAGATG AGAAATTAGA GGAAATTATA AACGCTTAG
 
Protein sequence
MENRFEISML IDYYGTLLTE KQFNVMTLYY NEDLSLAEIA EINKTSRQAI YDLIKRCSKQ 
LHSYDEKLKL SKKVDKRYRI KEELMAELNK NSNLDEDIKK YIDEKLEEII NA