Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1686 |
Symbol | |
ID | 4204048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1880512 |
End bp | 1880850 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642566236 |
Product | putative DNA-binding protein |
Protein accession | YP_699001 |
Protein GI | 110801455 |
COG category | [S] Function unknown |
COG ID | [COG2739] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000027159 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA GATTTGAAAT ATCAATGTTA ATAGATTACT ATGGAACATT GCTTACGGAA AAGCAGTTTA ATGTTATGAC CCTTTATTAC AATGAAGATT TGTCACTAGC AGAGATTGCT GAAATTAATA AAACCAGTAG GCAAGCAATT TATGATTTAA TCAAAAGATG CTCTAAGCAA CTTCATTCTT ATGATGAAAA ACTTAAATTA TCAAAAAAAG TTGATAAAAG GTATAGAATT AAAGAAGAGC TTATGGCAGA ATTAAATAAG AACTCTAATT TAGATGAAGA TATAAAAAAA TATATAGATG AGAAATTAGA GGAAATTATA AACGCTTAG
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Protein sequence | MENRFEISML IDYYGTLLTE KQFNVMTLYY NEDLSLAEIA EINKTSRQAI YDLIKRCSKQ LHSYDEKLKL SKKVDKRYRI KEELMAELNK NSNLDEDIKK YIDEKLEEII NA
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