| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1683 |
|---|
| Symbol | |
|---|
| ID | 4205929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1878592 |
|---|
| End bp | 1878819 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642566233 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698998 |
|---|
| Protein GI | 110803989 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1837] Predicted RNA-binding protein (contains KH domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000180762 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAT TAGTTGAAAT AATTGCTAAG TCACTAGTAG ATAAACCTGA GGATGTTCAT
GTAAATGAGG TCTTAGGAGA AGAATCAATC ATATTAGAAC TAAAGGTATC ACCTGAAGAT
ATGGGAAAAG TTATTGGAAA GCAAGGTAGA ATTGCCAAAG CTATCAGAAC AGTAGTGAAA
GCTGCTGCAA TTAAAGAAAA TAAAAAAGTT GTAGTAGAAA TCATTTAA
|
|---|
| Protein sequence | MKELVEIIAK SLVDKPEDVH VNEVLGEESI ILELKVSPED MGKVIGKQGR IAKAIRTVVK
AAAIKENKKV VVEII
|
|---|
| |