Gene CPR_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1672 
SymbolrpsB 
ID4204829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1867793 
End bp1868494 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content34% 
IMG OID642566222 
Product30S ribosomal protein S2 
Protein accessionYP_698987 
Protein GI110803157 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.87185e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAA TTTCAATGAA ACAATTATTA GAAGCTGGTG TTCATTTCGG ACATCAAACA 
AGAAGATGGA ACCCTAAAAT GGCTCCTTAC ATCTTTACAG AAAGAAACGG TATATACATA
ATCGATTTAC AAAAAACTGT AAAGAAAGCT GAAGAAGCTT ACAATTTTAT AAGAGAAGTA
TCAGAAGCTG GTAAAGACGT AATATTCGTT GGAACTAAAA AACAAGCTCA AGAAGCTGTT
AAAGAAGAAG CTGAAAGATC AAACATGTAC TTCGTTAACC ACAGATGGTT AGGAGGAATG
TTAACTAACT TCACAACTAT AAAAACAAGA ATAAACAGAT TAAACAAATT AGATGAAATG
GAACAAGACG GAACATTCGA CGTTTTACCT AAGAAAGAAG TAATCAAGTT AAAACTTGAA
AGAGAAAAAT TACAAAGAAA CTTAGGCGGA ATCAAAGAAT TAGACGCTTC AAACATAGGA
GCTATGTTCG TTGTTGACCC AAGAAAAGAA AAGAATGCAA TAGCAGAAGC TAAAATATTA
GGAATCCCAG TAGTTGCTAT AGTTGATACT AACTGTGATC CAGAAGAAGT TGACTACGTA
ATTCCAGGAA ATGACGATGC TATAAGAGCA GTTAAATTAA TAGCTGGTAA AATGGCAGAC
GCTATAATCG AAGGAAGACA AGGCGAGCAA TTAGCAGAGT AA
 
Protein sequence
MSVISMKQLL EAGVHFGHQT RRWNPKMAPY IFTERNGIYI IDLQKTVKKA EEAYNFIREV 
SEAGKDVIFV GTKKQAQEAV KEEAERSNMY FVNHRWLGGM LTNFTTIKTR INRLNKLDEM
EQDGTFDVLP KKEVIKLKLE REKLQRNLGG IKELDASNIG AMFVVDPRKE KNAIAEAKIL
GIPVVAIVDT NCDPEEVDYV IPGNDDAIRA VKLIAGKMAD AIIEGRQGEQ LAE