| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1666 |
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| Symbol | dxr |
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| ID | 4204790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1862275 |
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| End bp | 1863429 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566216 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_698981 |
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| Protein GI | 110802247 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.129419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAGAA TATCTATACT AGGGGTAACT GGTTCTATAG GAACTCAAAC TTTAGATGTA
TTAAGATTTC ATAAAGAAGA TTTTGAATTA GTTGGTATAA CAGCTAATAG AAATATAGAA
TTAACAATGG ATATAATAAA AGAGTTTTCA CCTAAATACG TTGCAATAAA TCACGAGGAG
TCTTACAAAA AACTTGTAGA TTTAGTAAAA AGCGAAGGAT TAAAGTGTGA AGTTATCTAT
GGTATGGAAG GCTTAGTTAA AGTTGCTACT TTAGATGAAA TTGATATAGT TGTTACTTCT
GTTGTTGGTA TGATTGGATT AAAACCAACT GTAGAAGCTA TAAGAAAAGG AAAAAATATC
GCTTTAGCAA ATAAAGAAAC TTTAGTAGTA GCAGGTGAAC TTGTTATGAG AGAAGCTAAA
GAAAATGGAG TAAAAATACT TGCGGTAGAT TCAGAACATA GTGCTATATT CCAATCATTA
CAAGGAAATG CTCATAACAA AATTGATAAA ATACTTTTAA CTGCTTCTGG AGGGCCTTTT
AGAGGATTTA CTATAAAAGA TTTAAAATCA GTAACTCCAG AAAGAGCTCT TAAGCATCCA
AAATGGAATA TGGGTCAAAA AATATCAATA GATTCATCAA CTCTAATGAA CAAGGGATTA
GAAGTTATAG AAGCTCATTG GTTATTTGAT TGTCCTTATA AAGATATAGA GGTTGTAGTT
CATCCACAAT CAATAATACA TTCTATGGTT CAATATACTG ATGGAGCAGT TATAGCTCAA
TTAGGTGTAC CAGATATGAA ATTACCAATT CAATATGCTT TAAATTATCC AAATAGAGAA
GGAAATATTA GTGAAAAGTT AGATTTGTTT AAAATTAGAG AGTTAACTTT TGAAAAGCCG
GATTTAGATA CATTTAAATG CTTAAAATTA GCTTATGAAG CAGGAGAAAA GGGAAAGCTT
ATGCCAACAA TCTTAAATGG TGCAAATGAA GTATGTGTTG AACTATTCCT AAATAAAAAG
ATAACATATC TGCAAATACC AGAGATAATA GAAGAATGTA TGAATACTTT TGATTACAAC
AAAGAGGTTA CTCTTGATAA TGTAATAAAT TTAGATAAAG AAGTAAGACA GTATATATAT
GAAAAATATA ACTAG
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| Protein sequence | MKRISILGVT GSIGTQTLDV LRFHKEDFEL VGITANRNIE LTMDIIKEFS PKYVAINHEE
SYKKLVDLVK SEGLKCEVIY GMEGLVKVAT LDEIDIVVTS VVGMIGLKPT VEAIRKGKNI
ALANKETLVV AGELVMREAK ENGVKILAVD SEHSAIFQSL QGNAHNKIDK ILLTASGGPF
RGFTIKDLKS VTPERALKHP KWNMGQKISI DSSTLMNKGL EVIEAHWLFD CPYKDIEVVV
HPQSIIHSMV QYTDGAVIAQ LGVPDMKLPI QYALNYPNRE GNISEKLDLF KIRELTFEKP
DLDTFKCLKL AYEAGEKGKL MPTILNGANE VCVELFLNKK ITYLQIPEII EECMNTFDYN
KEVTLDNVIN LDKEVRQYIY EKYN
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