| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1664 |
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| Symbol | ispG |
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| ID | 4206119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1860187 |
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| End bp | 1861236 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566214 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_698979 |
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| Protein GI | 110803791 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.704095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAGAA AAGAAACTAG AAAGGTTAAG ATTGGAAACA TATATGTTGG AGGAGATTTT
AGAGTTTCCA TTCAATCTAT GACCAATACA GATACAAAAG ATGTAGAATC TACAGTTAAA
CAAATAAAAG AGCTTCAAGA AGCTGGATGT GATATTGTTA GATGTGCAGT TTTAGATATG
GATGCAGCTT GCGCTATAAA AGATATAGTG GCAAAAATTA ATATACCACT AGTTGCAGAC
ATTCATTTTG ATTATAAATT AGCTTTAAAA GCAATAGAAA ATGGAGTTTC TGCAATAAGA
ATAAATCCAG GAAATATTGG ATCTAGGGAA AAGGTAGAAG CTGTAGTAAA AGCTTGTAAA
GAAAAAAATA TTCCTATAAG AATAGGGGTT AACTCAGGGT CATTATCAAA AGAGCTTTTA
GCAAAATACG GAAAACCTAC CCCAGATGCC CTAGTTGAAA GTGCATTAGA ACATGTTAAA
ATATTAGAAG AGTTAGATTT TCATGATATA GTAATTTCAA TGAAATCATC AAATGTTGAA
ACTATGATAG AAAGTTATAG AATAGCTTCA CAAAAAACAA ATTATCCTCT TCACTTAGGG
GTTACTGAGG CTGGTACACC TTGGAGAGGA ACAATAAAAT CTGCTATAGG AATAGGAACT
TTACTTGCAG AAGGAATAGG TGATACTATA AGAGTTTCTT TAACTGGAGA TCCTGTTGAA
GAGATAAAAG TAGGTAAAGA AATTCTTAAA AACTTTGGAT ATGTAAAAGA AGGAATAGAG
TTTATATCAT GTCCTACATG TGGAAGAACT CAAATAGACT TAATAAACAT AGCTAAAGAA
GTAGAAGAAA GATTAAGTTC TTGCAAGAAA AACATAAAGG TTGCAGTAAT GGGCTGTGTT
GTAAATGGAC CAGGAGAAGC AAGAGAGGCA GATATTGGAA TAGCTGGGGG TAAAGGCGAA
GGTCTTATCT TTAGAAAAGG TGAAATAATT AAAAAGGTAA AAGAAGAAGA CTTAGTTGAA
GAGCTTATAA AGATAATAGA AACAATATAA
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| Protein sequence | MNRKETRKVK IGNIYVGGDF RVSIQSMTNT DTKDVESTVK QIKELQEAGC DIVRCAVLDM
DAACAIKDIV AKINIPLVAD IHFDYKLALK AIENGVSAIR INPGNIGSRE KVEAVVKACK
EKNIPIRIGV NSGSLSKELL AKYGKPTPDA LVESALEHVK ILEELDFHDI VISMKSSNVE
TMIESYRIAS QKTNYPLHLG VTEAGTPWRG TIKSAIGIGT LLAEGIGDTI RVSLTGDPVE
EIKVGKEILK NFGYVKEGIE FISCPTCGRT QIDLINIAKE VEERLSSCKK NIKVAVMGCV
VNGPGEAREA DIGIAGGKGE GLIFRKGEII KKVKEEDLVE ELIKIIETI
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