Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1661 |
Symbol | nusA |
ID | 4204988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1853943 |
End bp | 1855043 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566211 |
Product | transcription elongation factor NusA |
Protein accession | YP_698976 |
Protein GI | 110803140 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAG AATTTCTAGG GGCATTATCT GAAATAGTAA AAGAGAAAGG TATTTCAGTA GAGGCTTTAT TAGAAACTAT AGATGATGCT ATAATAGCAG CTTATAAGAA AAACTTTTCA AATTCAGGAA CAACTGCACA AAATGTAAAG GTAAAACGTG ATGAGAAATC AGGAGAAATC CATGTTTATG CTCAAAAAGT TGTTGTTGAA GAAGTTTATG ATGATGTAAC AGAAATAAGT TTAGAAGATG CAAAGGCTAT TAGTGCTATT TATCAATTAG ATGATATAGT AGAAATAGAA GTAACACCTA AAAACTTTGG AAGAGTTGCA GCACAACTTG CTAAGCAAAT GGTTATCCAA AGAATAAAAG AATCTGAGAG AAATGTAATT TACTCAGAAT TTGCAGAAAA AGAATTTGAC ATATTACCTG GTACAGTAAT AAGAAAAGAT AAAGGTAATG TATTTGTAGA CTTAGGAAAA ATAGAAGGTG TTTTAGGACC AAATGAACAA ATGCCTACAG AAAAATATAA CTTCAATGAA AAATTACAAT TATACGTAGT TGAAGTTAAG AAAACATCTA AAGGTGCTTC AGTTTTATGT TCAAGAACAC ATCCAGGTTT AGTTAAAAGA TTATTTGAAT TAGAAGTTCC AGAAATATAT GAAGGAATAG TTGAAATAAA AAGTATAGCT AGAGAAGCAG GATCAAGAAC TAAAATAGCT GTTTACTCAA ATGATGAATC AGTAGATGCT ATGGGAGCTT GTGTTGGACC TAAGGGTGTT AGAGTTCAAA ATATAGTTAA TGAACTAAAA AATGAAAAAA TTGATATAAT AAAATGGAGT AATACTCCAT CTGAGTATAT AGAAAATGCT TTAAGCCCAG CTAAGGTTGT AAGTGTAGAA GCTGATGAAG AAACTAAATC AGCTAAGGTT ATAGTTGATG ATAGTCAATT ATCATTAGCT ATAGGTAAAG AAGGACAAAA TGTTAGATTA GCAGCTAAAT TAACTGGTTG GAAAATAGAC ATAAAGAGCA AATCTAAAGC AGAAGAATTA TTACAAGAAG AAGATATTGT TGTTAAAGAA GACACTATAA TAGAAGAATA A
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Protein sequence | MNEEFLGALS EIVKEKGISV EALLETIDDA IIAAYKKNFS NSGTTAQNVK VKRDEKSGEI HVYAQKVVVE EVYDDVTEIS LEDAKAISAI YQLDDIVEIE VTPKNFGRVA AQLAKQMVIQ RIKESERNVI YSEFAEKEFD ILPGTVIRKD KGNVFVDLGK IEGVLGPNEQ MPTEKYNFNE KLQLYVVEVK KTSKGASVLC SRTHPGLVKR LFELEVPEIY EGIVEIKSIA REAGSRTKIA VYSNDESVDA MGACVGPKGV RVQNIVNELK NEKIDIIKWS NTPSEYIENA LSPAKVVSVE ADEETKSAKV IVDDSQLSLA IGKEGQNVRL AAKLTGWKID IKSKSKAEEL LQEEDIVVKE DTIIEE
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