Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1606 |
Symbol | |
ID | 4205390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1797019 |
End bp | 1797585 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566157 |
Product | transcriptional regulatory protein, putative |
Protein accession | YP_698922 |
Protein GI | 110802125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00436475 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGTG TTATGAATTT AACAACTTTA GAACAAATAA AAGCATATTC AGATCCTTAT AGGCTGAAGA TAATAACTTA TCTTAGAAAT AATCAAGAAT CTGCTACGGT AAAGGAAATT GCTGATTTTT TTGGGGAAGT ACCAGCAAAA GTTCACTACC ATATTAAAAA ATTAGAAAAA GTAGGCATTT TAGAGCTTGT AAAAACAAAA GAAATAAAGG GAATAATAGC AAAATATTAT TATCTAACTG CAGAAAGCTT CAATATAGAG GGAAATCAAA TTAAAAAAGA AGCTAAACAA GTCTATAAAT CTCAAATATT AAATATTCTA AGTGAATATT ACGATAGTTC AAAGGAACAG ACTATGAAAA GAATATCTGA GAAAGTAGAT ACTGGTAATG CAGAGGATTC CATAGGGTTC AATTATAAGA ACATATACTT AAATGAAGAA GAGTTTAAAG AAGTAAATAG ACAAATGAGA GAACTGGTTA AAAAATACGA AAGAAAAGAA GAAGGAAAAA TGCCTTGTCA TGTATTTTCA GTTTGCTTAA AACATGAAGT AGAGTAA
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Protein sequence | MNSVMNLTTL EQIKAYSDPY RLKIITYLRN NQESATVKEI ADFFGEVPAK VHYHIKKLEK VGILELVKTK EIKGIIAKYY YLTAESFNIE GNQIKKEAKQ VYKSQILNIL SEYYDSSKEQ TMKRISEKVD TGNAEDSIGF NYKNIYLNEE EFKEVNRQMR ELVKKYERKE EGKMPCHVFS VCLKHEVE
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